ggKbase home page

cn_combo_scaffold_5168

Alias: PSE51_99

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_5168_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..906)
DNA (906bp) protein (302aa)
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQY8_PSEUX
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein {ECO:0000313|EMBL:AEA23687.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocar
cn_combo_scaffold_5168_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1060..2211
DNA (1152bp) protein (384aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase (EC:2.1.2.3)
Phosphoribosylaminoimidazolecarboxamide formyltransferase {ECO:0000313|EMBL:AEA23686.1}; EC=2.1.2.3 {ECO:0000313|EMBL:AEA23686.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; P
Phosphoribosylaminoimidazolecarboxamide formyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQY7_PSEUX
cn_combo_scaffold_5168_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2266..2745
DNA (480bp) protein (160aa)
Integral membrane protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQY6_PSEUX
hypothetical protein
Integral membrane protein {ECO:0000313|EMBL:AEA23685.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (
cn_combo_scaffold_5168_4
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2745..2981
DNA (237bp) protein (79aa)
Transcriptional regulator, XRE family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQY5_PSEUX
XRE family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:KJK33170.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (N
cn_combo_scaffold_5168_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3042..3443)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQX1_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23670.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_5168_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3494..4327)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQX0_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23669.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_5168_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4347..5207)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQW9_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23668.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_5168_8
unknown

Not on your lists

5307..5435
DNA (129bp) protein (43aa)

This feature has no annotations

cn_combo_scaffold_5168_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5401..6231
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQW6_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23665.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_5168_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6297..7538)
DNA (1242bp) protein (414aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQW4_PSEUX
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEA23663.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
cn_combo_scaffold_5168_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7613..8230
DNA (618bp) protein (206aa)
Regulatory protein TetR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQW3_PSEUX
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:AEA23662.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_5168_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8338..8778
DNA (441bp) protein (147aa)
Ferritin Dps family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQW2_PSEUX
ferritin
Ferritin Dps family protein {ECO:0000313|EMBL:AEA23661.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans
cn_combo_scaffold_5168_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8787..9179
DNA (393bp) protein (131aa)
Ferric uptake regulator, Fur family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPA1_PSEUX
Fur family ferric uptake regulator
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:AEA23660.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
cn_combo_scaffold_5168_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9463..10116
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPA0_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23659.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_5168_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10201..11460)
DNA (1260bp) protein (420aa)
Amidase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CP99_PSEUX
amidase
Amidase {ECO:0000313|EMBL:AEA23658.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486
cn_combo_scaffold_5168_16
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11486..13135)
DNA (1650bp) protein (550aa)
Cation/acetate symporter ActP n=1 Tax=Streptomyces sp. AA4 RepID=D9VCN8_9ACTO
Cation/acetate symporter ActP {ECO:0000313|EMBL:EFL05573.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
actP; cation/acetate symporter
cn_combo_scaffold_5168_17
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13132..13293)
DNA (162bp) protein (54aa)
clumping factor B n=1 Tax=Saccharopolyspora spinosa RepID=UPI00023798D6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ46836.1}; TaxID=861266 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter siccitolerans.;"
Displaying 17 items

View Taxonomy