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cn_combo_scaffold_5491

Alias: PSE51_111

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_5491_1
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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2..424
DNA (423bp) protein (141aa)
ABC transporter related protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S6M6_GEOOG
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADB75400.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obs
cn_combo_scaffold_5491_2
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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439..1455
DNA (1017bp) protein (339aa)
Inositol 2-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01671, ECO:0000256|SAAS:SAAS00010088}; EC=1.1.1.18 {ECO:0000256|HAMAP-Rule:MF_01671, ECO:0000256|SAAS:SAAS00010088};; Myo-inositol 2-dehydrogenase {
Oxidoreductase domain-containing protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VZJ5_9ACTO
oxidoreductase domain-containing protein
cn_combo_scaffold_5491_3
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1457..2326
DNA (870bp) protein (290aa)
Myo-inositol catabolism IolH protein n=1 Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6EHP4_AMYSD
myo-inositol catabolism IolH protein
Myo-inositol catabolism IolH protein {ECO:0000313|EMBL:AEF42408.1}; TaxID=443218 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Amycolicicoccus.;" source="Amycolicicoccus subf
cn_combo_scaffold_5491_4
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2323..3357
DNA (1035bp) protein (345aa)
Oxidoreductase, NAD-binding protein n=1 Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6EHP7_AMYSD
oxidoreductase NAD-binding protein
Oxidoreductase, NAD-binding protein {ECO:0000313|EMBL:AEF42411.1}; TaxID=443218 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Amycolicicoccus.;" source="Amycolicicoccus subfl
cn_combo_scaffold_5491_5
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3354..4226
DNA (873bp) protein (291aa)
myo-inosose-2 dehydratase (EC:4.2.1.44)
Myo-inosose-2 dehydratase {ECO:0000313|EMBL:ACV79680.1}; EC=4.2.1.44 {ECO:0000313|EMBL:ACV79680.1};; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" sou
hypothetical protein n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI00036BB41B
cn_combo_scaffold_5491_6
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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4223..5206
DNA (984bp) protein (328aa)
oxidoreductase domain-containing protein, partial n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE021
Oxidoreductase {ECO:0000313|EMBL:KDN72519.1}; TaxID=358823 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
oxidoreductase domain-containing protein
cn_combo_scaffold_5491_7
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5608..6057
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Rhodococcus sp. JVH1 RepID=J2JBF0_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:GAF47212.1}; TaxID=1219028 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.
hypothetical protein
cn_combo_scaffold_5491_8
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6621..7727
DNA (1107bp) protein (369aa)
Phytanoyl-CoA dioxygenase n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6KT80_STRRC
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:EST35400.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus sub
Phytanoyl-CoA dioxygenase
cn_combo_scaffold_5491_9
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7724..8728
DNA (1005bp) protein (335aa)
dehydrogenase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF356
oxidoreductase domain-containing protein
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:AGZ38963.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes fri
cn_combo_scaffold_5491_10
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8762..9412
DNA (651bp) protein (217aa)
transcriptional regulator n=1 Tax=Streptomyces violaceoniger RepID=UPI0003C74690
MerR family transcriptional regulator
MerR family transcriptional regulator {ECO:0000313|EMBL:AJF64294.1}; TaxID=362257 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamen
cn_combo_scaffold_5491_11
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9409..10356
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0ETW8_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:GAJ85353.1}; TaxID=1206724 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis NBRC 14402.;"
hypothetical protein
cn_combo_scaffold_5491_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10347..11183)
DNA (837bp) protein (279aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJS3_PSEUX
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEA25933.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia d
cn_combo_scaffold_5491_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11186..12076)
DNA (891bp) protein (297aa)
6-phosphogluconate dehydrogenase NAD-binding protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJS4_PSEUX
6-phosphogluconate dehydrogenase
6-phosphogluconate dehydrogenase NAD-binding protein {ECO:0000313|EMBL:AEA25934.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonoca
cn_combo_scaffold_5491_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12073..13542)
DNA (1470bp) protein (490aa)
Type III effector Hrp-dependent outers domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJS5_PSEUX
Hrp-dependent type III effector-domain-containing protein
Type III effector Hrp-dependent outers domain protein {ECO:0000313|EMBL:AEA25935.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonoc
cn_combo_scaffold_5491_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13539..14228)
DNA (690bp) protein (230aa)
GntR domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJS6_PSEUX
GntR family transcriptional regulator
GntR domain protein {ECO:0000313|EMBL:AEA25936.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
cn_combo_scaffold_5491_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14292..15050)
DNA (759bp) protein (253aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL95_PSEUX
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AEA25937.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
cn_combo_scaffold_5491_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15326..17581
DNA (2256bp) protein (752aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL96_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25938.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_5491_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17527..18420)
DNA (894bp) protein (298aa)
Cation diffusion facilitator family transporter n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL97_PSEUX
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:AEA25939.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudono
cn_combo_scaffold_5491_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18417..18707)
DNA (291bp) protein (97aa)
YCII-related protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL98_PSEUX
hypothetical protein
YCII-related protein {ECO:0000313|EMBL:AEA25940.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strai
cn_combo_scaffold_5491_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18704..19135)
DNA (432bp) protein (144aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL99_PSEUX
Activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:AEA25941.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
cn_combo_scaffold_5491_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19128..19454)
DNA (327bp) protein (109aa)
Regulatory protein ArsR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLA0_PSEUX
regulatory protein ArsR
Regulatory protein ArsR {ECO:0000313|EMBL:AEA25942.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_5491_22
unknown

Not on your lists

comp(19475..19837)
DNA (363bp) protein (121aa)

This feature has no annotations

cn_combo_scaffold_5491_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19957..21168)
DNA (1212bp) protein (404aa)
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLA2_PSEUX
ECF subfamily RNA polymerase sigma-24 subunit
Putative RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEA25944.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source=
cn_combo_scaffold_5491_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21165..21551)
DNA (387bp) protein (129aa)
YCII-related protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLA3_PSEUX
hypothetical protein
YCII-related protein {ECO:0000313|EMBL:AEA25945.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strai
cn_combo_scaffold_5491_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21675..22124
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLA4_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25946.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_5491_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22164..22550
DNA (387bp) protein (129aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLA5_PSEUX
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AEA25947.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseu
cn_combo_scaffold_5491_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22584..23783
DNA (1200bp) protein (400aa)
DNA polymerase IV (EC:2.7.7.7) rbh
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=675635 species="Bacteria; Actinobacteria; Pse
DNA polymerase IV n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLA6_PSEUX
cn_combo_scaffold_5491_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23867..24433
DNA (567bp) protein (189aa)
Transcriptional regulator, PadR-like family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLA7_PSEUX
PadR-like family transcriptional regulator
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:AEA25949.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocard
cn_combo_scaffold_5491_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24538..24807
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLA8_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25950.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_5491_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24917..25726)
DNA (810bp) protein (270aa)
NAD(+) synthase (EC:6.3.5.1)
NAD(+) synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:AEA25954.1}; EC=6.3.5.1 {ECO:0000313|EMBL:AEA25954.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae;
NAD(+) synthase (Glutamine-hydrolyzing) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLB2_PSEUX
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