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cn_combo_scaffold_9284

Alias: PSE51_222

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_9284_trna_1
unknown

Not on your lists

11..83
DNA (73bp)
transferRNA
cn_combo_scaffold_9284_1
unknown

Not on your lists

comp(523..705)
DNA (183bp) protein (61aa)

This feature has no annotations

cn_combo_scaffold_9284_2
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(768..1373)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026268EE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ24077.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
cn_combo_scaffold_9284_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1523..2125)
DNA (603bp) protein (201aa)
Regulatory protein TetR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CY32_PSEUX
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:AEA24273.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_9284_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2198..2518
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CY33_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24274.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_9284_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2533..3456)
DNA (924bp) protein (308aa)
Putative F420-dependent oxidoreductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYM1_PSEUX
F420-dependent oxidoreductase
Putative F420-dependent oxidoreductase {ECO:0000313|EMBL:AEA26591.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
cn_combo_scaffold_9284_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3557..4576
DNA (1020bp) protein (340aa)
Luciferase-like, subgroup n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKM3_PSEUX
luciferase-like protein
Luciferase-like, subgroup {ECO:0000313|EMBL:AEA23230.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (
cn_combo_scaffold_9284_7
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4578..5063)
DNA (486bp) protein (162aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhod
alkylhydroperoxidase n=1 Tax=Frankia sp. BCU110501 RepID=UPI000360A7CB
Uncharacterized protein ydfG
cn_combo_scaffold_9284_8
Streptomyces gancidicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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5204..6079
DNA (876bp) protein (292aa)
Sigma factor, sigma 70 type, group 4 (ECF) n=1 Tax=Streptomyces gancidicus BKS 13-15 RepID=M3BYB2_9ACTO
Sigma factor, sigma 70 type, group 4 (ECF) {ECO:0000313|EMBL:EMF29054.1}; TaxID=1284664 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces gan
ECF subfamily RNA polymerase sigma-24 subunit
cn_combo_scaffold_9284_9
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6085..6807)
DNA (723bp) protein (241aa)
Transcriptional regulator, GntR family n=1 Tax=Frankia sp. EUN1f RepID=D3D234_9ACTO
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EFC83002.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
GntR family transcriptional regulator
cn_combo_scaffold_9284_10
Streptomyces clavuligerus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(6861..8336)
DNA (1476bp) protein (492aa)
Amidase {ECO:0000313|EMBL:EFG07050.1}; EC=6.3.5.6 {ECO:0000313|EMBL:EFG07050.1};; TaxID=443255 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomy
amidase n=1 Tax=Pseudomonas syringae RepID=UPI0001E2958D
amidase family protein
cn_combo_scaffold_9284_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8336..9451)
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000362C3AC
putative aminotransferase, class 1/class 2
Putative aminotransferase, class 1/class 2 {ECO:0000313|EMBL:AGU49528.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va
cn_combo_scaffold_9284_12
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9448..10587)
DNA (1140bp) protein (380aa)
Peptidase dimerization domain protein n=1 Tax=Frankia sp. EUN1f RepID=D3D228_9ACTO
Peptidase dimerization domain protein {ECO:0000313|EMBL:EFC82996.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
hypothetical protein
Displaying 13 items

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