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CN-SCN_Pseudonocardia_51x

CN-SCN_Pseudonocardia_dioxanivorans_72_52
In projects: CN-SCN

Consensus taxonomy: Pseudonocardia dioxanivorans  →  Pseudonocardia  →  Pseudonocardiales  →  Actinobacteria  →  Actinobacteria  →  Bacteria

Description

Partial 9

Displaying items 301-350 of 408 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
cn_combo_scaffold_8502 PSE51_195
Species: Pseudonocardia dioxanivorans (87.5%)
8 7351 bp 75.23 50.51 88.56
cn_combo_scaffold_9794 PSE51_240
Species: Pseudonocardia dioxanivorans (100%)
4 6440 bp 74.08 52.39 88.56
cn_combo_scaffold_4746 PSE51_88
Species: Pseudonocardia dioxanivorans (71.79%)
39 32672 bp 70.66 49.38 88.48
cn_combo_scaffold_5973 PSE51_130
Species: Pseudonocardia dioxanivorans (83.33%)
18 15738 bp 72.60 53.09 88.47
cn_combo_scaffold_8823 PSE51_205
Species: Pseudonocardia dioxanivorans (100%)
8 7133 bp 72.87 52.47 88.45
cn_combo_scaffold_3723 PSE51_53
Species: Pseudonocardia dioxanivorans (66.67%)
21 21233 bp 72.90 54.37 88.45
cn_combo_scaffold_18431 PSE51_367
Species: Pseudonocardia dioxanivorans (100%)
5 6049 bp 73.00 50.34 88.43
cn_combo_scaffold_21229 PSE51_375
Species: Pseudonocardia dioxanivorans (100%)
6 5400 bp 73.13 54.87 88.39
cn_combo_scaffold_292 PSE51_3
Species: Pseudonocardia dioxanivorans (51.69%)
118 106520 bp 73.22 52.01 88.32
cn_combo_scaffold_9731 PSE51_237
Species: Pseudonocardia dioxanivorans (57.14%)
7 6480 bp 71.00 52.67 88.29
cn_combo_scaffold_12158 PSE51_316
Species: Pseudonocardia dioxanivorans (100%)
3 5250 bp 74.70 50.59 88.29
cn_combo_scaffold_8097 PSE51_188
Species: Pseudonocardia dioxanivorans (100%)
8 7680 bp 74.47 50.16 88.28
cn_combo_scaffold_8219 PSE51_189
Species: Saccharothrix espanaensis (55.56%)
9 8904 bp 63.66 11.81 88.24
cn_combo_scaffold_22011 PSE51_376b
Species: Pseudonocardia dioxanivorans (100%)
7 5229 bp 74.47 51.39 88.18
cn_combo_scaffold_11353 PSE51_285
Species: Pseudonocardia dioxanivorans (50%)
8 5600 bp 73.52 52.23 88.18
cn_combo_scaffold_2963 PSE51_34
Species: Pseudonocardia dioxanivorans (84.21%)
19 19101 bp 71.94 55.91 88.16
cn_combo_scaffold_9742 PSE51_238
Species: Pseudonocardia dioxanivorans (100%)
7 6476 bp 73.95 51.65 88.06
cn_combo_scaffold_820 PSE51_379
Class: Actinobacteria (56.45%)
62 58305 bp 72.88 58.65 88.00
cn_combo_scaffold_7714 PSE51_176
Species: Pseudonocardia dioxanivorans (90.91%)
11 8005 bp 74.20 53.58 87.96
cn_combo_scaffold_7481 PSE51_175
Species: Pseudonocardia dioxanivorans (100%)
8 8233 bp 73.93 47.86 87.93
cn_combo_scaffold_9573 PSE51_233
Species: Pseudonocardia dioxanivorans (100%)
7 6573 bp 74.36 50.17 87.91
cn_combo_scaffold_12557 PSE51_334
Species: Pseudonocardia dioxanivorans (81.82%)
11 8197 bp 72.55 57.41 87.84
cn_combo_scaffold_6454 PSE51_144
Species: Pseudonocardia dioxanivorans (94.44%)
18 21164 bp 73.42 51.11 87.83
cn_combo_scaffold_2459 PSE51_26
Species: Pseudonocardia dioxanivorans (68.42%)
38 31923 bp 73.21 53.01 87.82
cn_combo_scaffold_5311 PSE51_101
Species: Pseudonocardia dioxanivorans (54.55%)
11 11133 bp 73.76 51.15 87.82
cn_combo_scaffold_10480 PSE51_255
Species: Pseudonocardia dioxanivorans (100%)
6 6043 bp 74.63 51.70 87.77
cn_combo_scaffold_3601 PSE51_51
Species: Pseudonocardia dioxanivorans (85%)
20 15977 bp 71.73 57.24 87.75
cn_combo_scaffold_9773 PSE51_239
Species: Pseudonocardia dioxanivorans (100%)
8 6455 bp 72.89 54.86 87.75
cn_combo_scaffold_4220 PSE51_68
Species: Pseudonocardia dioxanivorans (71.43%)
21 19988 bp 72.78 51.37 87.68
cn_combo_scaffold_6209 PSE51_138
Species: Pseudonocardia dioxanivorans (100%)
9 9708 bp 70.76 57.55 87.67
cn_combo_scaffold_20641 PSE51_373
Genus: Mycobacterium (85.71%)
7 5439 bp 66.08 8.59 87.64
cn_combo_scaffold_4719 PSE51_86
Species: Pseudonocardia dioxanivorans (100%)
10 12438 bp 73.76 52.48 87.63
cn_combo_scaffold_10669 PSE51_264
Species: Pseudonocardia dioxanivorans (100%)
7 5937 bp 71.58 53.43 87.42
cn_combo_scaffold_9169 PSE51_216
Genus: Devosia (66.67%)
9 6863 bp 66.69 13.57 87.38
cn_combo_scaffold_9387 PSE51_227
Species: Pseudonocardia dioxanivorans (66.67%)
6 6690 bp 72.71 54.19 87.31
cn_combo_scaffold_6361 PSE51_143
Species: Pseudonocardia dioxanivorans (90.91%)
11 9508 bp 72.13 55.66 87.24
cn_combo_scaffold_9541 PSE51_398
Order: Pseudonocardiales (70%)
10 8597 bp 72.04 51.01 87.20
cn_combo_scaffold_9260 PSE51_221
Species: Pseudonocardia dioxanivorans (77.78%)
9 9505 bp 75.80 48.11 87.05
cn_combo_scaffold_5483 PSE51_109
Species: Pseudonocardia dioxanivorans (90.91%)
11 10848 bp 74.72 49.06 87.00
cn_combo_scaffold_6351 PSE51_392
Class: Actinobacteria (71.43%)
21 17013 bp 72.74 53.63 86.99
cn_combo_scaffold_12626 PSE51_336
Species: Pseudonocardia dioxanivorans (85.71%)
7 5921 bp 71.42 54.64 86.94
cn_combo_scaffold_11046 PSE51_274
Species: Pseudonocardia dioxanivorans (100%)
8 5750 bp 73.86 57.03 86.82
cn_combo_scaffold_172 PSE51_1
Class: Actinobacteria (85.37%)
123 137809 bp 70.79 54.20 86.74
cn_combo_scaffold_10973 PSE51_272
Species: Pseudonocardia dioxanivorans (100%)
7 5779 bp 73.01 50.89 86.69
cn_combo_scaffold_3187 PSE51_38
Class: Actinobacteria (68.18%)
22 17897 bp 69.46 52.98 86.49
cn_combo_scaffold_10281 PSE51_252
Species: Pseudonocardia dioxanivorans (77.78%)
9 9096 bp 73.27 50.74 86.33
cn_combo_scaffold_11445 PSE51_286
Species: Pseudonocardia dioxanivorans (88.89%)
9 9369 bp 73.67 49.93 86.23
cn_combo_scaffold_11638 PSE51_293
Species: Pseudonocardia dioxanivorans (83.33%)
6 5471 bp 72.27 49.04 86.18
cn_combo_scaffold_8050 PSE51_185
Species: Pseudonocardia dioxanivorans (100%)
7 7723 bp 73.08 51.53 86.16
cn_combo_scaffold_5161 PSE51_98
Species: Pseudonocardia dioxanivorans (92.31%)
13 11425 bp 72.51 52.38 86.10
Displaying items 301-350 of 408 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.