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cn_combo_scaffold_418

Alias: PSE87_345

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Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_418_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..321)
DNA (321bp) protein (107aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEA25315.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEA25315.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardia
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT16_PSEUX
cn_combo_scaffold_418_2
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(436..2040)
DNA (1605bp) protein (535aa)
Putative AMP-dependent synthetase and ligase n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13GX5_BURXL
AMP-binding enzyme family protein rbh
AMP-binding enzyme family protein {ECO:0000313|EMBL:AJZ63052.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkhold
cn_combo_scaffold_418_3
actinobacterium acAcidi, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2048..2248)
DNA (201bp) protein (67aa)
Probable ferredoxin n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GC16_9BRAD
Ferredoxin {ECO:0000313|EMBL:KGA11574.1}; TaxID=1504320 species="Bacteria; Actinobacteria.;" source="actinobacterium acAcidi.;"
ferredoxin
cn_combo_scaffold_418_4
unknown

Not on your lists

2282..2908
DNA (627bp) protein (209aa)

This feature has no annotations

cn_combo_scaffold_418_5
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2711..3814)
DNA (1104bp) protein (368aa)
Alcohol dehydrogenase, zinc-binding protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AV61_RUBXD
zinc-binding alcohol dehydrogenase
Alcohol dehydrogenase, zinc-binding protein {ECO:0000313|EMBL:ABG04717.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobact
cn_combo_scaffold_418_6
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3816..5261)
DNA (1446bp) protein (482aa)
betaine-aldehyde dehydrogenase (EC:1.2.1.8)
Betaine-aldehyde dehydrogenase {ECO:0000313|EMBL:CAM02173.1}; EC=1.2.1.8 {ECO:0000313|EMBL:CAM02173.1};; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharo
Betaine-aldehyde dehydrogenase n=2 Tax=Saccharopolyspora erythraea RepID=A4FDP8_SACEN
cn_combo_scaffold_418_7
Gordonia paraffinivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5258..5743)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Gordonia paraffinivorans NBRC 108238 RepID=M3V4W0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAC84612.1}; TaxID=1223543 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia paraffinivorans NBRC 108238.;"
cn_combo_scaffold_418_8
Gordonia paraffinivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5746..6903)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Gordonia paraffinivorans NBRC 108238 RepID=M3TSM1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAC84611.1}; TaxID=1223543 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia paraffinivorans NBRC 108238.;"
hypothetical protein
cn_combo_scaffold_418_9
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6934..8283)
DNA (1350bp) protein (450aa)
MFS transporter n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF24E
Major facilitator superfamily sugar transporter {ECO:0000313|EMBL:EKT81611.1}; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opac
sugar (and other) transporter family protein
cn_combo_scaffold_418_10
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9044..9613)
DNA (570bp) protein (190aa)
MarR family transcriptional regulator n=1 Tax=Frankia sp. BMG5.12 RepID=UPI0003783792
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ACQ79135.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (st
cn_combo_scaffold_418_11
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9974..10825
DNA (852bp) protein (284aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0K0F0_CUPNH
enoyl-CoA hydratase/isomerase family protein
Enoyl-CoA hydratase/isomerase family protein {ECO:0000313|EMBL:AJZ62373.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" sourc
cn_combo_scaffold_418_12
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11052..12080)
DNA (1029bp) protein (343aa)
2-nitropropane dioxygenase family protein n=1 Tax=Rhodococcus sp. JVH1 RepID=J2JFW0_9NOCA
2-nitropropane dioxygenase {ECO:0000313|EMBL:AII08405.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
2-nitropropane dioxygenase
cn_combo_scaffold_418_13
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12077..13732)
DNA (1656bp) protein (552aa)
AMP-dependent synthetase n=1 Tax=Rhodococcus opacus RepID=UPI00029CD600
Putative acyl-CoA synthetase YngI
Putative acyl-CoA synthetase YngI {ECO:0000313|EMBL:AHK34148.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
cn_combo_scaffold_418_14
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13849..14730
DNA (882bp) protein (294aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase {ECO:0000313|EMBL:CAJ96523.1}; EC=4.2.1.17 {ECO:0000313|EMBL:CAJ96523.1};; TaxID=381666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cu
Enoyl-CoA hydratase n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0K0F1_CUPNH
cn_combo_scaffold_418_15
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15457..16011
DNA (555bp) protein (185aa)
MarR family transcriptional regulator n=1 Tax=Amycolatopsis methanolica RepID=UPI0003707184
MarR family transcriptional regulator {ECO:0000313|EMBL:ETK30804.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp.
MarR family transcriptional regulator
cn_combo_scaffold_418_16
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16095..17294
DNA (1200bp) protein (400aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T060_MICAI
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:ADL47296.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromo
cn_combo_scaffold_418_17
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17335..18153
DNA (819bp) protein (273aa)
short-chain dehydrogenase n=1 Tax=Frankia sp. BMG5.12 RepID=UPI0003772EE2
short-chain dehydrogenase Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
short-chain dehydrogenase/reductase SDR
cn_combo_scaffold_418_18
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18146..19285
DNA (1140bp) protein (380aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J930_FRASU
L-carnitine dehydratase/bile acid-inducible protein F
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:ADP80909.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI
cn_combo_scaffold_418_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

19309..20391
DNA (1083bp) protein (361aa)
acyl-CoA transferase/carnitine dehydratase Tax=GWA2_Rokubacteria_70_23_curated
Putative CoA-transferase family III id=3369100 bin=GWF2_Methylomirabilis_70_14 species=uncultured marine crenarchaeote HF4000_APKG6D9 genus=unknown taxon_order=Nitrosopumilales taxon_class=unknown phylum=Thaumarchaeota tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
L-carnitine dehydratase/bile acid-inducible protein F
cn_combo_scaffold_418_20
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20407..21369
DNA (963bp) protein (321aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0K0F0_CUPNH
enoyl-CoA hydratase/isomerase family protein
Enoyl-CoA hydratase/isomerase family protein {ECO:0000313|EMBL:AJZ62373.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" sourc
cn_combo_scaffold_418_21
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21362..23005
DNA (1644bp) protein (548aa)
putative AMP-dependent synthetase and ligase (EC:6.2.1.3)
Putative AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABE36664.1}; EC=6.2.1.3 {ECO:0000313|EMBL:ABE36664.1};; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
Putative AMP-dependent synthetase and ligase n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13GX5_BURXL
cn_combo_scaffold_418_22
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23142..24242
DNA (1101bp) protein (367aa)
ABC transporter substrate-binding protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000380E82F
tauA; ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:CAI10595.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromat
cn_combo_scaffold_418_23
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24272..25132
DNA (861bp) protein (287aa)
ABC transporter ATP-binding protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MNE6_9BURK
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AET94335.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkh
cn_combo_scaffold_418_24
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25129..25947
DNA (819bp) protein (273aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21B20_RHOPB
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABD86416.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
cn_combo_scaffold_418_25
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25944..27125
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Arthrobacter sp. TB 23 RepID=UPI0002D50EA9
major facilitator superfamily MFS_1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CCG04441.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobs
cn_combo_scaffold_418_26
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27122..28255
DNA (1134bp) protein (378aa)
Peroxisomal hydratase-dehydrogenase-epimerase n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HPC4_9ACTO
coA-transferase III family protein
CoA-transferase III family protein {ECO:0000313|EMBL:AJZ64065.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkhol
cn_combo_scaffold_418_27
Dietzia cinnamea, Dietzia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28252..29634
DNA (1383bp) protein (461aa)
Transcriptional regulator, CdaR n=1 Tax=Dietzia cinnamea P4 RepID=E6JDJ5_9ACTO
Transcriptional regulator, CdaR {ECO:0000313|EMBL:EFV90345.1}; TaxID=910954 species="Bacteria; Actinobacteria; Corynebacteriales; Dietziaceae; Dietzia.;" source="Dietzia cinnamea P4.;"
GAF domain-containing protein
cn_combo_scaffold_418_28
Streptomyces iranensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29568..30638)
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000374D8B4
Mycothiol-dependent formaldehyde dehydrogenase {ECO:0000313|EMBL:CDR17552.1}; TaxID=576784 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces
alcohol dehydrogenase zinc-binding domain-containing protein
cn_combo_scaffold_418_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30779..32314
DNA (1536bp) protein (512aa)
methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27)
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:AEA25932.1}; EC=1.2.1.27 {ECO:0000313|EMBL:AEA25932.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiace
Methylmalonate-semialdehyde dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJS2_PSEUX
cn_combo_scaffold_418_30
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32337..33500)
DNA (1164bp) protein (388aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T060_MICAI
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:ADL47296.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromo
Displaying items 1-30 of 78 in total

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