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cn_combo_scaffold_987

Alias: PSE87_350

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Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_987_1
unknown

Not on your lists

comp(3..86)
DNA (84bp) protein (28aa)

This feature has no annotations

cn_combo_scaffold_987_2
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(556..1275)
DNA (720bp) protein (240aa)
Putative GntR family transcriptional regulator n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1B7B0_RHOOB
GntR family transcriptional regulator
Putative GntR family transcriptional regulator {ECO:0000313|EMBL:BAH51563.1}; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus
cn_combo_scaffold_987_3
Rhodococcus sp. JVH1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2004..2402)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Rhodococcus sp. JVH1 RepID=J2J7D0_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:EJI95857.1}; TaxID=745408 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. JVH1.;"
hypothetical protein
cn_combo_scaffold_987_4
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2440..2967)
DNA (528bp) protein (176aa)
membrane protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262698C
Uncharacterized protein {ECO:0000313|EMBL:KIH99500.1}; TaxID=183763 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
hypothetical protein
cn_combo_scaffold_987_5
Rhodococcus pyridinivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2964..4175)
DNA (1212bp) protein (404aa)
cytochrome P450 n=1 Tax=Rhodococcus rhodochrous RepID=UPI0002DF1629
Cytochrome P450 monooxygenase {ECO:0000313|EMBL:EHK82401.1}; TaxID=1114960 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus pyridinivorans AK37.;"
cytochrome P450
cn_combo_scaffold_987_6
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4244..5248)
DNA (1005bp) protein (335aa)
Flavodoxin reductase family protein n=1 Tax=Frankia sp. QA3 RepID=I9A0B5_9ACTO
Flavodoxin reductase family protein {ECO:0000313|EMBL:EIV92826.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
ferredoxin
cn_combo_scaffold_987_7
Streptomyces sp. Tu 6176, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5238..6167)
DNA (930bp) protein (310aa)
dioxygenase n=1 Tax=Streptomyces sp. Amel2xE9 RepID=UPI00037C059F
Dioxygenase {ECO:0000313|EMBL:EYT81394.1}; TaxID=1470557 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Tu 6176.;"
glyoxalase/bleomycin resistance protein/dioxygenase
cn_combo_scaffold_987_8
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6212..7069)
DNA (858bp) protein (286aa)
fumarylacetoacetate hydrolase n=1 Tax=Streptomyces sp. Amel2xE9 RepID=UPI000379182F
Fumarylacetoacetate hydrolase {ECO:0000313|EMBL:EXU68076.1}; TaxID=1158056 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
fumarylacetoacetate hydrolase family
cn_combo_scaffold_987_9
Rhodococcus sp. JVH1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7092..8306)
DNA (1215bp) protein (405aa)
Acyl-CoA dehydrogenase, C-terminal domain protein n=1 Tax=Rhodococcus sp. JVH1 RepID=J1QW44_9NOCA
Acyl-CoA dehydrogenase, C-terminal domain protein {ECO:0000313|EMBL:EJI95858.1}; TaxID=745408 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp.
acyl-CoA dehydrogenase rbh
Naphthocyclinone hydroxylase Rose Kantor (9/22/14)
cn_combo_scaffold_987_10
Streptomyces griseoaurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8539..9579)
DNA (1041bp) protein (347aa)
Transcriptional regulator n=1 Tax=Streptomyces griseoaurantiacus M045 RepID=F3NPQ5_9ACTO
Transcriptional regulator {ECO:0000313|EMBL:EGG44575.1}; TaxID=996637 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoaurantiacus M04
AraC family transcriptional regulator
cn_combo_scaffold_987_11
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9720..10460
DNA (741bp) protein (247aa)
Putative GntR family transcriptional regulator n=1 Tax=Gordonia sihwensis NBRC 108236 RepID=L7LME5_9ACTO
Regulatory protein GntR {ECO:0000313|EMBL:EWM17343.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
GntR family transcriptional regulator
cn_combo_scaffold_987_12
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11284..12171
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F69493
RNA polymerase sigma24 factor {ECO:0000313|EMBL:KJR10331.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
ECF family RNA polymerase sigma-24 subunit
cn_combo_scaffold_987_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12708..13106)
DNA (399bp) protein (133aa)
ferredoxin-NADP reductase (EC:1.18.1.2)
Ferredoxin--NADP(+) reductase {ECO:0000313|EMBL:AEA24951.1}; EC=1.18.1.2 {ECO:0000313|EMBL:AEA24951.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudono
Ferredoxin--NADP(+) reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL22_PSEUX
cn_combo_scaffold_987_14
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13161..13856)
DNA (696bp) protein (232aa)
Transcriptional regulator, IclR family n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2PRY3_9PSEU
IclR family transcriptional regulator
IclR family transcriptional regulator {ECO:0000313|EMBL:AJK56843.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis luri
cn_combo_scaffold_987_15
Mycobacterium rufum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14029..14829
DNA (801bp) protein (267aa)
Protocatechuate 3,4-dioxygenase, beta subunit n=1 Tax=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) RepID=A1T2K2_MYCVP
Protocatechuate 3,4-dioxygenase {ECO:0000313|EMBL:KGI65902.1}; TaxID=318424 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rufum.;"
protocatechuate 3,4-dioxygenase subunit beta
benzoate degradation Rose Kantor (9/22/14)
cn_combo_scaffold_987_16
Gordonia sihwensis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14829..15398
DNA (570bp) protein (190aa)
Protocatechuate 3,4-dioxygenase alpha subunit n=1 Tax=Gordonia sihwensis NBRC 108236 RepID=L7LSA5_9ACTO
Protocatechuate 3,4-dioxygenase alpha subunit {ECO:0000313|EMBL:GAC62923.1}; TaxID=1223544 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sihwensis NB
protocatechuate 3,4-dioxygenase subunit alpha
benzoate degradation Rose Kantor (9/22/14)
cn_combo_scaffold_987_17
Mycobacterium cosmeticum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15395..16606
DNA (1212bp) protein (404aa)
pcaB; 3-carboxy-cis,cis-muconate cycloisomerase (EC:5.5.1.2)
3-carboxy-cis,cis-muconate cycloisomerase PcaB n=1 Tax=Gordonia polyisoprenivorans (strain DSM 44266 / VH2) RepID=H6MR12_GORPV
3-carboxy-cis,cis-muconate cycloisomerase {ECO:0000313|EMBL:CDO10209.1}; TaxID=258533 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium cos
benzoate degradation Rose Kantor (9/22/14)
cn_combo_scaffold_987_18
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16603..17175
DNA (573bp) protein (191aa)
4-carboxymuconolactone decarboxylase / 3-oxoadipate enol-lactonase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SFE5_NOCSJ
3-oxoadipate enol-lactonase {ECO:0000313|EMBL:KHL12481.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
4-carboxymuconolactone decarboxylase
benzoate degradation Rose Kantor (9/22/14)
cn_combo_scaffold_987_19
Gordonia aichiensis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17236..17694)
DNA (459bp) protein (153aa)
Putative transposase (Fragment) n=4 Tax=Gordonia RepID=L7KRM1_9ACTO
Putative transposase {ECO:0000313|EMBL:GAC51269.1}; Flags: Fragment;; TaxID=1220583 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia aichiensis NBRC 108
transposase
cn_combo_scaffold_987_20
Burkholderia phytofirmans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17691..18644)
DNA (954bp) protein (318aa)
MerR family transcriptional regulator n=1 Tax=Burkholderia ubonensis RepID=UPI00016A28E6
DNA-binding transcriptional regulator CynR
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACD16546.1}; TaxID=398527 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Bur
cn_combo_scaffold_987_21
unknown

Not on your lists

19361..20170
DNA (810bp) protein (270aa)

This feature has no annotations

cn_combo_scaffold_987_22
unknown

Not on your lists

comp(20512..20670)
DNA (159bp) protein (53aa)

This feature has no annotations

cn_combo_scaffold_987_23
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21180..21548)
DNA (369bp) protein (123aa)
Transposase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F0R6_MODMB
transposase
Transposase {ECO:0000313|EMBL:CCH89229.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
cn_combo_scaffold_987_24
Mycobacterium intracellulare, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21836..22672
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Mycobacterium intracellulare (strain ATCC 13950 / DSM 43223 / JCM 6384 / NCTC 13025 / 3600) RepID=H8INP5_MYCIA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFC43993.1}; TaxID=487521 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="
nitrile hydratase beta subunit Rose Kantor (9/22/14)
cn_combo_scaffold_987_25
Mycobacterium yongonense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22710..23420
DNA (711bp) protein (237aa)
Thiocyanate hydrolase gamma subunit n=2 Tax=Mycobacterium RepID=S4ZC22_9MYCO
thiocyanate hydrolase gamma subunit
Thiocyanate hydrolase gamma subunit {ECO:0000313|EMBL:AGP64170.1}; TaxID=1138871 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC
nitrile hydratase alpha subunit, but with the conserved arginine from thiocyanate hydrolase. Rose Kantor (9/23/14)
cn_combo_scaffold_987_26
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23435..23785
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6EF06_AMYSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF42143.1}; TaxID=443218 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Amycolicicoccus.;" source="Amycolicicoccus subflavus (strain
thiocyanate hydrolase activator protein Rose Kantor (9/22/14)
cn_combo_scaffold_987_27
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24131..24952
DNA (822bp) protein (274aa)
Formate/nitrite transporter superfamily protein n=6 Tax=Mycobacterium avium RepID=A0QFJ4_MYCA1
nitrite transporter
Nitrite transporter {ECO:0000313|EMBL:KDP09646.1}; TaxID=1402966 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Myc
cn_combo_scaffold_987_28
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

24949..26208
DNA (1260bp) protein (420aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00036534D4
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=RBG_16_Actinobacteria_68_12_curated
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
cn_combo_scaffold_987_29
Mycobacterium nebraskense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26213..26533
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Streptomyces davawensis JCM 4913 RepID=K4QW82_9ACTO
Sulfur relay protein DsrC {ECO:0000313|EMBL:KKC03447.1}; TaxID=244292 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium nebraskense.;"
hypothetical protein
cn_combo_scaffold_987_30
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26568..27941
DNA (1374bp) protein (458aa)
Beta-lactamase domain protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X7H9_NAKMY
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:ACV78932.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain AT
Displaying items 1-30 of 54 in total

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