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cn_combo_scaffold_1165

Alias: PSE87_352

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1165_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..577
DNA (576bp) protein (192aa)
Regulatory protein TetR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNW6_PSEUX
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:AEA22771.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_1165_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(650..1723)
DNA (1074bp) protein (358aa)
Aminoglycoside phosphotransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNW4_PSEUX
aminoglycoside phosphotransferase rbh
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:AEA22769.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxani
cn_combo_scaffold_1165_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1720..2163)
DNA (444bp) protein (148aa)
MaoC domain protein dehydratase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNW3_PSEUX
acyl dehydratase MaoC
MaoC domain protein dehydratase {ECO:0000313|EMBL:AEA22768.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivo
cn_combo_scaffold_1165_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2160..2957)
DNA (798bp) protein (266aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNW2_PSEUX
enoyl-CoA hydratase rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:AEA22767.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
cn_combo_scaffold_1165_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2954..3211)
DNA (258bp) protein (86aa)
Biotin/lipoyl attachment domain-containing protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNW1_PSEUX
biotin/lipoyl attachment domain-containing protein
Biotin/lipoyl attachment domain-containing protein {ECO:0000313|EMBL:AEA22766.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseud
cn_combo_scaffold_1165_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3260..3622
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNW0_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22765.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_1165_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3635..4555
DNA (921bp) protein (307aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEA22764.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEA22764.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardia
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNV9_PSEUX
cn_combo_scaffold_1165_8
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

4681..6225
DNA (1545bp) protein (515aa)
chdh; choline dehydrogenase (EC:1.1.99.1) Tax=RBG_16_Chloroflexi_68_14_curated
hypothetical protein n=1 Tax=Streptomyces sp. ATexAB-D23 RepID=UPI00035ED396
glucose-methanol-choline oxidoreductase
cn_combo_scaffold_1165_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6315..7790
DNA (1476bp) protein (492aa)
betaine-aldehyde dehydrogenase (EC:1.2.1.8)
Betaine-aldehyde dehydrogenase {ECO:0000313|EMBL:AEA24034.1}; EC=1.2.1.8 {ECO:0000313|EMBL:AEA24034.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudono
aldehyde dehydrogenase n=1 Tax=Rhodococcus sp. DK17 RepID=UPI0002D8EAB9
cn_combo_scaffold_1165_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7834..9462)
DNA (1629bp) protein (543aa)
O-succinylbenzoate--CoA ligase {ECO:0000313|EMBL:AEA22763.1}; EC=6.2.1.26 {ECO:0000313|EMBL:AEA22763.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudon
o-succinylbenzoate--CoA ligase (EC:6.2.1.26) rbh
O-succinylbenzoate--CoA ligase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNV8_PSEUX
cn_combo_scaffold_1165_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9588..10337
DNA (750bp) protein (250aa)
Regulatory protein ArsR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNV6_PSEUX
regulatory protein ArsR rbh
Regulatory protein ArsR {ECO:0000313|EMBL:AEA22761.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_1165_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10370..11473
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM77_PSEUX
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA22760.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_1165_13
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11609..12760
DNA (1152bp) protein (384aa)
ABC transporter related protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PYS0_KRIFD
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADB29916.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM
cn_combo_scaffold_1165_14
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13033..14274
DNA (1242bp) protein (414aa)
Putative transposase, IS4 family n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SA69_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJL26874.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
transposase
cn_combo_scaffold_1165_15
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14865..16010)
DNA (1146bp) protein (382aa)
Histidine kinase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C475_BEUC1
histidine kinase rbh
Histidine kinase {ECO:0000313|EMBL:ACQ79988.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM
cn_combo_scaffold_1165_16
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16007..16714)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00035C926B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD40480.1}; Flags: Precursor;; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nass
cn_combo_scaffold_1165_17
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16926..17489
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 / JCM 7437 / NCTC 10488) RepID=D7B2Z8_NOCDD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH68688.1}; Flags: Precursor;; TaxID=446468 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis das
cn_combo_scaffold_1165_18
Brachybacterium phenoliresistens, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17486..18136
DNA (651bp) protein (217aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C474_BEUC1
LuxR family transcriptional regulator {ECO:0000313|EMBL:EWS82362.1}; TaxID=396014 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium phenoli
two component LuxR family transcriptional regulator rbh
cn_combo_scaffold_1165_19
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18259..19191)
DNA (933bp) protein (311aa)
oxidoreductase n=1 Tax=Streptomyces RepID=UPI0001FFF9E6
Oxidoreductase {ECO:0000313|EMBL:KEI44536.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
aldo/keto reductase
cn_combo_scaffold_1165_20
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19175..19693)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI0003733542
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ45346.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358
cn_combo_scaffold_1165_21
unknown

Not on your lists

20138..20380
DNA (243bp) protein (81aa)

This feature has no annotations

cn_combo_scaffold_1165_22
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20526..21236
DNA (711bp) protein (237aa)
Uncharacterized protein n=4 Tax=Amycolatopsis mediterranei RepID=I7D003_AMYMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK42246.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strai
cn_combo_scaffold_1165_23
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21712..22143
DNA (432bp) protein (144aa)
type VI secretion protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B56BFF
Uncharacterized protein {ECO:0000313|EMBL:CDJ99363.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
cn_combo_scaffold_1165_24
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22214..22684
DNA (471bp) protein (157aa)
Single-strand binding protein/Primosomal replication protein n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GDM1_PROFC
Single-strand binding protein/Primosomal replication protein {ECO:0000313|EMBL:CEH06297.1}; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;
ssDNA-binding protein
cn_combo_scaffold_1165_25
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22692..23267
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B33B3A
Uncharacterized protein {ECO:0000313|EMBL:CEI28258.1}; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenre
hypothetical protein
cn_combo_scaffold_1165_26
unknown

Not on your lists

23264..23464
DNA (201bp) protein (67aa)

This feature has no annotations

cn_combo_scaffold_1165_27
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23538..24542)
DNA (1005bp) protein (335aa)
Putative recombinase n=1 Tax=Gordonia otitidis NBRC 100426 RepID=H5TIP1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJL23593.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
serine recombinase
cn_combo_scaffold_1165_28
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24976..25320
DNA (345bp) protein (115aa)
Predicted protein n=1 Tax=Streptomyces sp. AA4 RepID=D9UW33_9ACTO
Predicted protein {ECO:0000313|EMBL:EFL10567.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
ABC transporter
cn_combo_scaffold_1165_29
Streptomyces fulvissimus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25325..25861
DNA (537bp) protein (179aa)
Aminoglycoside N6'-acetyltransferase (EC:2.3.1.82)
Uncharacterized protein {ECO:0000313|EMBL:AGK79083.1}; EC=2.3.1.82 {ECO:0000313|EMBL:AGK79083.1};; TaxID=1303692 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;"
hypothetical protein n=1 Tax=Streptomyces sp. Wigar10 RepID=UPI00030A6D78
cn_combo_scaffold_1165_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25938..27011)
DNA (1074bp) protein (358aa)
Regulatory protein TetR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM76_PSEUX
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:AEA22759.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
Displaying items 1-30 of 48 in total

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