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cn_combo_scaffold_1203

Alias: PSE87_354

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1203_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..189)
DNA (189bp) protein (63aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=675635 species="Bacteria; Actinobact
Transaldolase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNB9_PSEUX
transaldolase
cn_combo_scaffold_1203_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

873..1541
DNA (669bp) protein (223aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNC0_PSEUX
antibiotic biosynthesis monooxygenase rbh
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:AEA27144.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dio
cn_combo_scaffold_1203_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1748..2278)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNC1_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27145.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_1203_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2660..3331
DNA (672bp) protein (224aa)
Regulatory protein TetR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNC2_PSEUX
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:AEA27146.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_1203_5
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4460..4927
DNA (468bp) protein (156aa)
Integrase catalytic region n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F0R5_MODMB
transposase
Integrase catalytic region {ECO:0000313|EMBL:CCH89228.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (stra
cn_combo_scaffold_1203_6
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5477..6925
DNA (1449bp) protein (483aa)
Putative RNA-directed DNA polymerase {ECO:0000313|EMBL:CCM65197.1}; EC=2.7.7.49 {ECO:0000313|EMBL:CCM65197.1};; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candid
Putative RNA-directed DNA polymerase n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z795_9ACTN
RNA-directed DNA polymerase
cn_combo_scaffold_1203_7
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7366..7644
DNA (279bp) protein (93aa)
Putative hydrolase n=1 Tax=Saccharopolyspora erythraea (strain NRRL 23338) RepID=A4F6N1_SACEN
hydrolase
Putative hydrolase {ECO:0000313|EMBL:CAL99705.1}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strai
cn_combo_scaffold_1203_8
Streptomyces griseus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7641..7820
DNA (180bp) protein (60aa)
Putative alcohol dehydrogenase {ECO:0000313|EMBL:BAG17450.1}; TaxID=455632 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseus subsp. g
cn_combo_scaffold_1203_9
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7778..8662
DNA (885bp) protein (295aa)
Alcohol dehydrogenase n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W136_9ACTO
alcohol dehydrogenase rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:AGZ42859.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;
cn_combo_scaffold_1203_10
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9143..9946
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI0003746C09
Transcriptional regulator {ECO:0000313|EMBL:EOD67371.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina D
hypothetical protein
cn_combo_scaffold_1203_11
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10241..11158)
DNA (918bp) protein (306aa)
NADPH:quinone reductase (EC:1.6.5.5)
Uncharacterized protein n=1 Tax=Streptomyces sp. HGB0020 RepID=S2YWP1_9ACTO
Zinc-binding oxidoreductase {ECO:0000313|EMBL:EWM10003.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
cn_combo_scaffold_1203_12
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11294..12706)
DNA (1413bp) protein (471aa)
GntR family transcriptional regulator (EC:2.6.1.39) rbh
GntR-family transcriptional regulator n=2 Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=I7FT40_MYCS2
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EWM10004.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
cn_combo_scaffold_1203_13
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12858..13364)
DNA (507bp) protein (169aa)
transcriptional regulator n=1 Tax=Rhodococcus rhodochrous RepID=UPI0002DFDCB3
Transcriptional regulator {ECO:0000313|EMBL:EWM10491.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
putative HxlR family transcriptional regulator
cn_combo_scaffold_1203_trna_1
unknown

Not on your lists

comp(13572..13638)
DNA (67bp)
transferRNA
cn_combo_scaffold_1203_14
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13931..14395)
DNA (465bp) protein (155aa)
Citrate lyase beta subunit n=1 Tax=Pseudomonas sp. GM41(2012) RepID=J2S343_9PSED
HpcH/HpaI aldolase/citrate lyase family protein {ECO:0000313|EMBL:CCQ46151.1}; TaxID=861266 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sicci
citrate lyase subunit beta
cn_combo_scaffold_1203_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14720..15919
DNA (1200bp) protein (400aa)
DoxX family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTK4_PSEUX
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:AEA28507.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
cn_combo_scaffold_1203_16
Gordonia sp. KTR9, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16060..17304
DNA (1245bp) protein (415aa)
Acetyl-CoA acetyltransferase n=1 Tax=Gordonia sp. KTR9 RepID=J9SRI7_9ACTO
Acetyl-CoA acetyltransferase
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AFR50963.1}; TaxID=337191 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sp. KTR9.;"
cn_combo_scaffold_1203_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18380..19075)
DNA (696bp) protein (232aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLJ4_PSEUX
enoyl-CoA hydratase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:AEA27047.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
cn_combo_scaffold_1203_18
unknown

Not on your lists

comp(19185..19637)
DNA (453bp) protein (151aa)

This feature has no annotations

cn_combo_scaffold_1203_19
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19637..20410)
DNA (774bp) protein (258aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:AIY15865.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AIY15865.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidacea
Ketoreductase/dehydrogenase n=1 Tax=Streptomyces hygroscopicus RepID=Q54295_STRHY
oxidoreductase
cn_combo_scaffold_1203_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20410..21498)
DNA (1089bp) protein (363aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNY3_PSEUX
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:AEA22788.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudon
cn_combo_scaffold_1203_21
Streptomyces ghanaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21518..22597)
DNA (1080bp) protein (360aa)
Aminoglycoside phosphotransferase n=2 Tax=Streptomyces RepID=D6A2P9_9ACTO
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:EFE71487.2}; TaxID=566461 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ghanaensis AT
aminoglycoside phosphotransferase
cn_combo_scaffold_1203_22
Streptomyces ghanaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22608..23423)
DNA (816bp) protein (272aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Streptomyces ghanaensis ATCC 14672 RepID=D6A2Q7_9ACTO
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EFE71495.2}; TaxID=566461 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ghanaen
cn_combo_scaffold_1203_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23420..24670)
DNA (1251bp) protein (417aa)
acyl-CoA dehydrogenase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDACA
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:AEA22783.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudon
cn_combo_scaffold_1203_24
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24667..25479)
DNA (813bp) protein (271aa)
enoyl-CoA hydratase n=1 Tax=Frankia sp. BCU110501 RepID=UPI000379094B
enoyl-CoA hydratase/isomerase family protein
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ABW13681.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
cn_combo_scaffold_1203_25
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25522..27135)
DNA (1614bp) protein (538aa)
CoA ligase (EC:6.2.1.-)
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI00037705DF
AMP-dependent synthetase {ECO:0000313|EMBL:AII10445.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
cn_combo_scaffold_1203_26
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27165..28334)
DNA (1170bp) protein (390aa)
Acetyl-CoA acetyltransferase n=1 Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BKA2_MYCCN
Uncharacterized protein {ECO:0000313|EMBL:KBZ69308.1}; TaxID=1324261 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source
acetyl-CoA acetyltransferase
cn_combo_scaffold_1203_27
Gordonia namibiensis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28318..28536)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Gordonia namibiensis NBRC 108229 RepID=K6XAJ4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAC01398.1}; TaxID=1208314 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia namibiensis NBRC 108229.;"
putative nucleic-acid-binding protein containing a Zn-ribbon
cn_combo_scaffold_1203_28
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28766..29323)
DNA (558bp) protein (186aa)
Carboxymuconolactone decarboxylase n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=D9XDC5_STRVR
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:EFL36772.1}; TaxID=591159 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromo
hypothetical protein
cn_combo_scaffold_1203_29
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29320..29742)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YS00_NOCFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD59041.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
Displaying items 1-30 of 40 in total

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