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cn_combo_scaffold_1334

Alias: PSE87_357

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1334_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..766
DNA (765bp) protein (255aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;"
Histidine kinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D207_PSEUX
histidine kinase
cn_combo_scaffold_1334_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(772..1413)
DNA (642bp) protein (214aa)
Methyltransferase type 12 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D205_PSEUX
type 12 methyltransferase
Methyltransferase type 12 {ECO:0000313|EMBL:AEA28065.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (
cn_combo_scaffold_1334_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1410..2105)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D204_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28064.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_1334_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2111..2758)
DNA (648bp) protein (216aa)
Glycosyl transferase family 2 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D203_PSEUX
family 2 glycosyl transferase rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEA28063.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
cn_combo_scaffold_1334_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2832..3881)
DNA (1050bp) protein (350aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:AEA28062.1}; EC=5.1.3.2 {ECO:0000313|EMBL:AEA28062.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.
UDP-glucose 4-epimerase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D202_PSEUX
cn_combo_scaffold_1334_6
Streptomyces sp. R1-NS-10, Streptomyces, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(3918..4313)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI0003826126
cn_combo_scaffold_1334_7
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4530..5063
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI00037E5CFA
hypothetical protein
Lactoylglutathione lyase protein {ECO:0000313|EMBL:ACM28765.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacte
cn_combo_scaffold_1334_8
Rhodococcus equi, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5115..6104)
DNA (990bp) protein (330aa)
Ferredoxin--NADP reductase {ECO:0000256|HAMAP-Rule:MF_01685}; Short=FNR {ECO:0000256|HAMAP-Rule:MF_01685};; Short=Fd-NADP(+) reductase {ECO:0000256|HAMAP-Rule:MF_01685};; EC=1.18.1.2 {ECO:0000256|HAMA
ferredoxin--NADP reductase (EC:1.18.1.2)
hypothetical protein n=1 Tax=Nocardia sp. 348MFTsu5.1 RepID=UPI0003667F14
cn_combo_scaffold_1334_9
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6181..7725)
DNA (1545bp) protein (515aa)
MFS transporter n=1 Tax=Rhodococcus ruber BKS 20-38 RepID=M3A4F4_9NOCA
MFS transporter {ECO:0000313|EMBL:EME67364.1}; TaxID=1278076 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber BKS 20-38.;"
major facilitator transporter
cn_combo_scaffold_1334_10
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8035..8313
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI00036AF484
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL90584.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain
cn_combo_scaffold_1334_11
Mycobacterium thermoresistibile, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8354..9793
DNA (1440bp) protein (480aa)
hypothetical protein n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI00037564D5
Rieske (2Fe-2S) domain-containing protein {ECO:0000313|EMBL:EHI13391.1}; TaxID=1078020 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium th
Rieske (2Fe-2S) domain-containing protein rbh
cn_combo_scaffold_1334_12
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10008..10931
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Nocardia sp. 348MFTsu5.1 RepID=UPI0003791C56
Putative IclR family transcriptional regulator {ECO:0000313|EMBL:CDZ87366.1}; TaxID=1830 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber.;"
IclR-type transcriptional regulator
cn_combo_scaffold_1334_13
Streptomyces sp. R1-NS-10, Streptomyces, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(10963..11430)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI000367176E
cn_combo_scaffold_1334_14
Nocardia sp. 348MFTsu5.1, Nocardia, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

11570..12040
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Nocardia sp. 348MFTsu5.1 RepID=UPI0003728303
cn_combo_scaffold_1334_15
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12037..12909
DNA (873bp) protein (291aa)
Putative hydrolase n=1 Tax=Nocardia asteroides NBRC 15531 RepID=U5E751_NOCAS
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:ELP64916.1}; TaxID=698760 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidisca
alpha/beta hydrolase
cn_combo_scaffold_1334_16
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12972..13829)
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Nocardia sp. 348MFTsu5.1 RepID=UPI00036B2C3C
Putative 2,3-dihydroxybiphenyl 1,2-dioxygenase {ECO:0000313|EMBL:ELP64921.1}; TaxID=698760 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces
2,3-dihydroxybiphenyl 1,2-dioxygenase rbh
cn_combo_scaffold_1334_17
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14073..15467
DNA (1395bp) protein (465aa)
GntR domain protein n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A4X8_THECD
GntR family transcriptional regulator rbh
GntR domain protein {ECO:0000313|EMBL:ACY98147.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain
cn_combo_scaffold_1334_18
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15482..17146)
DNA (1665bp) protein (555aa)
hypothetical protein n=1 Tax=Nocardia sp. 348MFTsu5.1 RepID=UPI000363F128
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein rbh
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein {ECO:0000313|EMBL:ADP78640.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Franki
cn_combo_scaffold_1334_19
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17181..18659)
DNA (1479bp) protein (493aa)
MFS transporter n=1 Tax=Janibacter hoylei PVAS-1 RepID=K1DX29_9MICO
hypothetical protein rbh
Putative MFS-type transporter yhcA {ECO:0000313|EMBL:AHK31671.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
cn_combo_scaffold_1334_20
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19245..19445)
DNA (201bp) protein (67aa)
Molybdopterin dinucleotide-binding region n=1 Tax=Mycobacterium tusciae JS617 RepID=H1KB38_9MYCO
Anaerobic dehydrogenase, typically selenocysteine-containing {ECO:0000313|EMBL:KID31566.1}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" sourc
anaerobic dehydrogenase, typically selenocysteine-containing
cn_combo_scaffold_1334_21
Enterobacter sp. BIDMC 29, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19623..21101)
DNA (1479bp) protein (493aa)
UbiD family decarboxylase n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=D2ZAS3_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:EUM12311.1}; TaxID=1329841 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae c
UbiD family decarboxylase
cn_combo_scaffold_1334_22
Enterobacter asburiae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21098..21661)
DNA (564bp) protein (188aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=640513 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Entero
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Enterobacter asburiae (strain LF7a) RepID=G2S729_ENTAL
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
cn_combo_scaffold_1334_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22029..23012
DNA (984bp) protein (328aa)
Transcriptional regulator, AraC family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQQ8_PSEUX
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEA23076.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
cn_combo_scaffold_1334_24
Rhodococcus sp. JVH1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23079..23783)
DNA (705bp) protein (235aa)
DJ-1/PfpI family protein n=1 Tax=Rhodococcus sp. JVH1 RepID=J1ZBT0_9NOCA
DJ-1/PfpI family protein {ECO:0000313|EMBL:EJI98540.1}; TaxID=745408 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. JVH1.;"
ThiJ/PfpI domain-containing protein
cn_combo_scaffold_1334_25
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23780..24169)
DNA (390bp) protein (130aa)
Predicted protein n=1 Tax=Streptomyces sp. AA4 RepID=D9V106_9ACTO
Predicted protein {ECO:0000313|EMBL:EFL06765.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
putative polyketide cyclase/dehydrase
cn_combo_scaffold_1334_26
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24225..25661)
DNA (1437bp) protein (479aa)
NAD-dependent aldehyde dehydrogenase n=1 Tax=Frankia sp. QA3 RepID=I8QS84_9ACTO
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:EIV92854.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
putative succinate-semialdehyde dehydrogenase
cn_combo_scaffold_1334_27
Gordonia polyisoprenivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25756..26142)
DNA (387bp) protein (129aa)
Putative snoaL-like polyketide cyclase n=1 Tax=Gordonia polyisoprenivorans (strain DSM 44266 / VH2) RepID=H6MYN7_GORPV
putative snoaL-like polyketide cyclase
Putative snoaL-like polyketide cyclase {ECO:0000313|EMBL:AFA71915.1}; TaxID=1112204 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia polyisoprenivorans
cn_combo_scaffold_1334_28
Gordonia polyisoprenivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26171..26920)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Gordonia polyisoprenivorans (strain DSM 44266 / VH2) RepID=H6MYN6_GORPV
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFA71914.1}; TaxID=1112204 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia polyisoprenivorans (strain DSM 442
cn_combo_scaffold_1334_29
Gordonia polyisoprenivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26917..28161)
DNA (1245bp) protein (415aa)
Putative ferredoxin--NAD(+) reductase n=1 Tax=Gordonia polyisoprenivorans (strain DSM 44266 / VH2) RepID=H6MYN5_GORPV
putative ferredoxin--NAD(+) reductase rbh
Putative ferredoxin--NAD(+) reductase {ECO:0000313|EMBL:AFA71913.1}; TaxID=1112204 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia polyisoprenivorans (
cn_combo_scaffold_1334_30
Gordonia polyisoprenivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28161..28496)
DNA (336bp) protein (112aa)
Putative Rieske (2Fe-2S) ferredoxin n=1 Tax=Gordonia polyisoprenivorans (strain DSM 44266 / VH2) RepID=H6MYN4_GORPV
putative Rieske (2Fe-2S) ferredoxin
Putative Rieske (2Fe-2S) ferredoxin {ECO:0000313|EMBL:AFA71912.1}; TaxID=1112204 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia polyisoprenivorans (st
Displaying items 1-30 of 45 in total

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