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cn_combo_scaffold_1375

Alias: PSE87_358

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1375_1
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..1246
DNA (1245bp) protein (415aa)
GntR family transcriptional regulator n=1 Tax=Salinispora pacifica RepID=UPI00036FED99
Micromonospora carbonacea strain JXNU-1 contig2, whole genome shotgun sequence {ECO:0000313|EMBL:KIR63361.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr
GntR family transcriptional regulator
cn_combo_scaffold_1375_2
unknown

Not on your lists

comp(1226..1429)
DNA (204bp) protein (68aa)

This feature has no annotations

cn_combo_scaffold_1375_3
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1560..2342)
DNA (783bp) protein (261aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WAY7_KINRD
short-chain dehydrogenase/reductase SDR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABS03976.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans
cn_combo_scaffold_1375_4
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2321..3628)
DNA (1308bp) protein (436aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-R
histidinol dehydrogenase (EC:1.1.1.23) rbh
Histidinol dehydrogenase n=1 Tax=Mycobacterium smegmatis MKD8 RepID=L8FK71_MYCSM
cn_combo_scaffold_1375_5
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3729..4733
DNA (1005bp) protein (335aa)
Transcriptional regulator LacI family {ECO:0000313|EMBL:CKH43000.1}; EC=5.1.1.1 {ECO:0000313|EMBL:CKH43000.1};; TaxID=1772 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycob
Transcriptional regulator LacI family n=1 Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=A0QTY7_MYCS2
LacI family transcriptional regulator rbh
cn_combo_scaffold_1375_6
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4756..5688)
DNA (933bp) protein (311aa)
2-hydroxy-3-oxopropionate reductase n=1 Tax=Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 / JCM 7437 / NCTC 10488) RepID=D7AXC8_NOCDD
2-hydroxy-3-oxopropionate reductase
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:ADH66002.1}; Flags: Precursor;; TaxID=446468 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Noca
cn_combo_scaffold_1375_7
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5720..6871
DNA (1152bp) protein (384aa)
epoxide hydrolase n=1 Tax=Streptomyces canus RepID=UPI000365C2E5
Uncharacterized protein {ECO:0000313|EMBL:EPD64153.1}; TaxID=1078086 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
epoxide hydrolase
cn_combo_scaffold_1375_8
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6901..7404
DNA (504bp) protein (168aa)
Flavin reductase-like, FMN-binding protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8B8_NOVAD
flavin reductase-like protein
Flavin reductase-like, FMN-binding protein {ECO:0000313|EMBL:ABD25905.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
cn_combo_scaffold_1375_9
Corynebacterium halotolerans, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7472..8116)
DNA (645bp) protein (215aa)
bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein (EC:4.1.99.12)
Riboflavin biosynthesis protein RibBA n=1 Tax=Corynebacterium halotolerans YIM 70093 = DSM 44683 RepID=M1MXT3_9CORY
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=1121362 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Coryneba
cn_combo_scaffold_1375_10
unknown

Not on your lists

comp(8167..8469)
DNA (303bp) protein (101aa)

This feature has no annotations

cn_combo_scaffold_1375_11
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8463..9734)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Mycobacterium smegmatis MKD8 RepID=L8FLK6_MYCSM
Uncharacterized protein {ECO:0000313|EMBL:ELQ91432.1}; TaxID=1214915 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis MKD8.;"
hypothetical protein
cn_combo_scaffold_1375_12
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9731..11089)
DNA (1359bp) protein (453aa)
SAF domain-containing protein (EC:1.1.1.3)
flagellar protein FlgA n=1 Tax=Glaciibacter superstes RepID=UPI0003B76432
Putative homoserine dehydrogenase {ECO:0000313|EMBL:ELQ91429.1}; TaxID=1214915 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis
cn_combo_scaffold_1375_13
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11472..12266)
DNA (795bp) protein (265aa)
PEP phosphonomutase-like enzyme n=1 Tax=Herbaspirillum sp. CF444 RepID=J2UCW9_9BURK
PEP phosphonomutase-like enzyme {ECO:0000313|EMBL:EJL89147.1}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbasp
cn_combo_scaffold_1375_14
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12351..13181)
DNA (831bp) protein (277aa)
haloalkane dehalogenase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262864A
alpha/beta hydrolase fold containing protein
Putative haloalkane dehalogenase {ECO:0000313|EMBL:BAC72491.1}; TaxID=227882 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (s
cn_combo_scaffold_1375_15
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13178..14251)
DNA (1074bp) protein (358aa)
Luciferase-like, subgroup n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AWN5_FRADG
luciferase-like protein rbh
Luciferase-like, subgroup {ECO:0000313|EMBL:AEH09376.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
cn_combo_scaffold_1375_16
unknown

Not on your lists

comp(15031..15237)
DNA (207bp) protein (69aa)

This feature has no annotations

cn_combo_scaffold_1375_17
Pseudomonas sp. StFLB209, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15534..16313
DNA (780bp) protein (260aa)
Putative IclR family regulatory protein n=1 Tax=Pseudomonas sp. CF161 RepID=S6IND5_9PSED
transcriptional regulator, IclR family
Transcriptional regulator, IclR family {ECO:0000313|EMBL:BAP46265.1}; TaxID=1028989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Ps
cn_combo_scaffold_1375_18
unknown

Not on your lists

comp(16705..16893)
DNA (189bp) protein (63aa)

This feature has no annotations

cn_combo_scaffold_1375_19
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17030..18355
DNA (1326bp) protein (442aa)
Major facilitator superfamily MFS_1 n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0K1D2_ARTS2
Sugar (And other) transporter family protein {ECO:0000313|EMBL:CCQ48000.1}; TaxID=861266 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter siccitol
major facilitator transporter
cn_combo_scaffold_1375_20
Dietzia sp. UCD-THP, Dietzia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18775..19347
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Dietzia sp. UCD-THP RepID=UPI000371244F
Uncharacterized protein {ECO:0000313|EMBL:EYT51866.1}; TaxID=1292020 species="Bacteria; Actinobacteria; Corynebacteriales; Dietziaceae; Dietzia.;" source="Dietzia sp. UCD-THP.;"
hypothetical protein
cn_combo_scaffold_1375_21
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20113..20883
DNA (771bp) protein (257aa)
Transcriptional regulator, IclR family n=1 Tax=Mycobacterium smegmatis MKD8 RepID=L8FKJ3_MYCSM
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ELQ91895.1}; TaxID=1214915 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegm
IclR family transcriptional regulator
cn_combo_scaffold_1375_22
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20880..21788)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037D1A28
Uncharacterized protein {ECO:0000313|EMBL:AII08125.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
hypothetical protein
cn_combo_scaffold_1375_23
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21788..22585)
DNA (798bp) protein (266aa)
Citrate synthase (EC:2.3.3.1)
Citrate synthase {ECO:0000313|EMBL:CKI09474.1}; EC=2.3.3.1 {ECO:0000313|EMBL:CKI09474.1};; TaxID=1772 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="M
Citrate synthase n=1 Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=A0QZI3_MYCS2
cn_combo_scaffold_1375_24
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22582..24252)
DNA (1671bp) protein (557aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IQK1_9BURK
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:EIF33003.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.
AMP-binding enzyme family protein rbh
cn_combo_scaffold_1375_25
SAR116 cluster alpha proteobacterium HIMB100, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24254..24967)
DNA (714bp) protein (238aa)
short chain enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase/carnithine racemase n=1 Tax=SAR116 cluster alpha proteobacterium HIMB100 RepID=G6A054_9PROT
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:EHI48089.1}; TaxID=909943 species="Bacteria; Proteobacteria; Alphaproteobacteria; SAR116 cluster.;" source="SAR116 cluster alpha proteobacteri
cn_combo_scaffold_1375_26
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25056..26393)
DNA (1338bp) protein (446aa)
Putative integral membrane sugar transporter n=1 Tax=Mycobacterium smegmatis MKD8 RepID=L8FKN2_MYCSM
Putative integral membrane sugar transporter {ECO:0000313|EMBL:ELQ91889.1}; TaxID=1214915 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium
major facilitator superfamily protein
cn_combo_scaffold_1375_27
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26486..27403)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00035CD291
Uncharacterized protein {ECO:0000313|EMBL:ETW94247.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
cn_combo_scaffold_1375_28
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27425..27853)
DNA (429bp) protein (143aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IT07_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66517.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingo
cn_combo_scaffold_1375_29
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27892..29511)
DNA (1620bp) protein (540aa)
dicarboxylate-CoA ligase PimA n=1 Tax=Rhodococcus opacus RepID=UPI00029CB332
putative crotonobetaine/carnitine-CoA ligase
Plasmid 9, complete sequence {ECO:0000313|EMBL:AHK36177.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
cn_combo_scaffold_1375_30
unknown

Not on your lists

comp(29905..30114)
DNA (210bp) protein (70aa)

This feature has no annotations

Displaying items 1-30 of 41 in total

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