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cn_combo_scaffold_1493

Alias: PSE87_360

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1493_1
Actinopolyspora erythraea, Actinopolyspora, Actinopolysporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

112..846
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6V7_PSEUX
Uncharacterized protein {ECO:0000313|EMBL:KGI80618.1}; TaxID=414996 species="Bacteria; Actinobacteria; Actinopolysporales; Actinopolysporaceae; Actinopolyspora.;" source="Actinopolyspora erythraea.;"
hypothetical protein
cn_combo_scaffold_1493_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

846..2204
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Actinopolyspora halophila RepID=UPI000366F4FA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28828.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_1493_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2201..3733
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6V5_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28827.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_1493_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3733..5289
DNA (1557bp) protein (519aa)
ATP-binding protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6V4_PSEUX
ATP-binding protein
ATP-binding protein {ECO:0000313|EMBL:AEA28826.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
cn_combo_scaffold_1493_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5303..6445
DNA (1143bp) protein (381aa)
NLP/P60 protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6V1_PSEUX
NLP/P60 protein
NLP/P60 protein {ECO:0000313|EMBL:AEA28823.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxan
cn_combo_scaffold_1493_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6442..8319
DNA (1878bp) protein (626aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6V0_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28822.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
cn_combo_scaffold_1493_7
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8635..9555
DNA (921bp) protein (307aa)
DNA polymerase n=1 Tax=Saccharomonospora saliphila RepID=UPI00036AB622
DNA polymerase LigD-like ligase domain-containing protein {ECO:0000313|EMBL:EHR51189.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" sou
Putative DNA ligase-like protein
cn_combo_scaffold_1493_8
Gordonia sp. KTR9, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10097..11014
DNA (918bp) protein (306aa)
plasmid partitioning protein ParA n=1 Tax=Arthrobacter sp. TB 23 RepID=UPI00031BF5D4
ATPase
ATPases involved in chromosome partitioning {ECO:0000313|EMBL:ADK68875.1}; TaxID=337191 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sp. KTR9.;"
cn_combo_scaffold_1493_9
Capronia coronata, Capronia, Chaetothyriales, Chaetothyriomycetidae, Ascomycota, Fungi

Not on your lists

11011..11610
DNA (600bp) protein (200aa)
Uncharacterized protein {ECO:0000313|EMBL:EXJ83722.1}; TaxID=1182541 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Chaetothyriomycetidae; Chaetothyriales; Herpotrichi
cn_combo_scaffold_1493_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11573..12619)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6H4_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28868.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_1493_11
unknown

Not on your lists

comp(13192..13437)
DNA (246bp) protein (82aa)

This feature has no annotations

cn_combo_scaffold_1493_12
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13693..14550)
DNA (858bp) protein (286aa)
Helix-turn-helix domain protein n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4SXP1_AMYOR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIG79782.1}; TaxID=208439 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;"
cn_combo_scaffold_1493_13
Nocardiopsis alba, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14555..15112)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Nocardiopsis alba (strain ATCC BAA-2165 / BE74) RepID=J7KZD4_NOCAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFR06763.1}; TaxID=1205910 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strain ATCC BAA
cn_combo_scaffold_1493_14
unknown

Not on your lists

comp(15112..15438)
DNA (327bp) protein (109aa)

This feature has no annotations

cn_combo_scaffold_1493_15
unknown

Not on your lists

15717..15920
DNA (204bp) protein (68aa)

This feature has no annotations

cn_combo_scaffold_1493_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15983..16276
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6J0_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28884.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_1493_17
unknown

Not on your lists

16267..16467
DNA (201bp) protein (67aa)

This feature has no annotations

cn_combo_scaffold_1493_18
Actinokineospora enzanensis, Actinokineospora, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

16464..17597
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00037F244B
cn_combo_scaffold_1493_19
Actinopolyspora erythraea, Actinopolyspora, Actinopolysporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17594..19357
DNA (1764bp) protein (588aa)
ORF15 n=1 Tax=Amycolatopsis benzoatilytica RepID=A3FG48_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:KGI79309.1}; TaxID=414996 species="Bacteria; Actinobacteria; Actinopolysporales; Actinopolysporaceae; Actinopolyspora.;" source="Actinopolyspora erythraea.;"
type IV secretory pathway VirD4 protein-like protein
cn_combo_scaffold_1493_20
Actinopolyspora erythraea, Actinopolyspora, Actinopolysporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19354..20211
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6I7_PSEUX
Uncharacterized protein {ECO:0000313|EMBL:KGI79310.1}; TaxID=414996 species="Bacteria; Actinobacteria; Actinopolysporales; Actinopolysporaceae; Actinopolyspora.;" source="Actinopolyspora erythraea.;"
hypothetical protein
cn_combo_scaffold_1493_21
Rhodococcus sp. NS1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20554..23061
DNA (2508bp) protein (836aa)
Putative uncharacterized protein n=1 Tax=Gordonia amarae NBRC 15530 RepID=G7GJ66_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:AIU93445.1}; TaxID=402236 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. NS1.;"
helicase c2 rbh
cn_combo_scaffold_1493_22
unknown

Not on your lists

23323..24009
DNA (687bp) protein (229aa)

This feature has no annotations

cn_combo_scaffold_1493_23
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24247..24495)
DNA (249bp) protein (83aa)
putative PAS/PAC sensor protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
cn_combo_scaffold_1493_24
unknown

Not on your lists

24796..25140
DNA (345bp) protein (115aa)

This feature has no annotations

cn_combo_scaffold_1493_25
Streptomyces zinciresistens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25479..26309)
DNA (831bp) protein (277aa)
IstB domain protein ATP-binding protein n=1 Tax=Streptomyces zinciresistens K42 RepID=G2GMJ3_9ACTO
IstB domain protein ATP-binding protein {ECO:0000313|EMBL:EGX55269.1}; TaxID=700597 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces zincire
IstB domain-containing protein ATP-binding protein
cn_combo_scaffold_1493_26
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26306..27826)
DNA (1521bp) protein (507aa)
Transposase n=1 Tax=Mycobacterium avium 10-5560 RepID=V7NGE0_MYCAV
Transposase {ECO:0000313|EMBL:ETB46366.1}; TaxID=1391999 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacteri
integrase catalytic subunit
cn_combo_scaffold_1493_27
unknown

Not on your lists

28018..28740
DNA (723bp) protein (241aa)

This feature has no annotations

cn_combo_scaffold_1493_28
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28945..29601
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE167
Uncharacterized protein {ECO:0000313|EMBL:KGN40646.1}; TaxID=1385519 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
NERD domain-containing protein
cn_combo_scaffold_1493_29
Amycolatopsis benzoatilytica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29674..34143)
DNA (4470bp) protein (1490aa)
ORF16 n=1 Tax=Amycolatopsis benzoatilytica RepID=A3FG49_9PSEU
ORF16 {ECO:0000313|EMBL:ABN48424.1}; TaxID=346045 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis benzoatilytica.;"
TrwC relaxase
Displaying 29 items

View Taxonomy