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cn_combo_scaffold_1517

Alias: PSE87_361

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1517_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..128)
DNA (126bp) protein (42aa)
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase, large subunit {ECO:0000313|EMBL:AEA26566.1}; EC=5.4.99.2 {ECO:0000313|EMBL:AEA26566.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae
methylmalonyl-CoA mutase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEB70
cn_combo_scaffold_1517_2
unknown

Not on your lists

365..568
DNA (204bp) protein (68aa)

This feature has no annotations

cn_combo_scaffold_1517_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

588..1373
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYJ4_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26564.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_1517_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1370..2803)
DNA (1434bp) protein (478aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYJ3_PSEUX
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEA26563.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
cn_combo_scaffold_1517_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2915..3634
DNA (720bp) protein (240aa)
Tetracyclin repressor domain-containing protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYJ2_PSEUX
tetracycline repressor rbh
Tetracyclin repressor domain-containing protein {ECO:0000313|EMBL:AEA26562.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudono
cn_combo_scaffold_1517_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3676..4245)
DNA (570bp) protein (190aa)
GCN5-related N-acetyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYJ1_PSEUX
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEA26561.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxaniv
cn_combo_scaffold_1517_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4242..5891)
DNA (1650bp) protein (550aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXI6_PSEUX
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA26560.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_1517_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5902..6900)
DNA (999bp) protein (333aa)
glucokinase (EC:2.7.1.2)
Glucokinase {ECO:0000313|EMBL:AEA26559.1}; EC=2.7.1.2 {ECO:0000313|EMBL:AEA26559.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="P
Glucokinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXI5_PSEUX
cn_combo_scaffold_1517_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6982..8334
DNA (1353bp) protein (451aa)
DoxX family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXI4_PSEUX
DoxX family protein rbh
DoxX family protein {ECO:0000313|EMBL:AEA26558.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
cn_combo_scaffold_1517_10
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8387..9163)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI000365674E
Multidrug ABC transporter permease {ECO:0000313|EMBL:AKH81476.1}; TaxID=444103 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.
ABC-2 type transporter
cn_combo_scaffold_1517_11
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9160..10110)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Streptomyces niveus NCIMB 11891 RepID=V6JL94_STRNV
Uncharacterized protein {ECO:0000313|EMBL:EST20498.1}; TaxID=1352941 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
ABC transporter ATP-binding protein
cn_combo_scaffold_1517_12
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10330..10938)
DNA (609bp) protein (203aa)
Transcriptional regulator, PadR-like family n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AVJ9_FRADG
PadR-like family transcriptional regulator
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:AEH11313.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca g
cn_combo_scaffold_1517_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11074..11448
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXI3_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26557.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_1517_14
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11490..12839)
DNA (1350bp) protein (450aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI0003600654
MmgE/PrpD family protein
MmgE/PrpD family protein {ECO:0000313|EMBL:ACA16401.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacter
cn_combo_scaffold_1517_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12839..14311)
DNA (1473bp) protein (491aa)
allantoinase (EC:3.5.2.5)
Allantoinase {ECO:0000313|EMBL:AEA26364.1}; EC=3.5.2.5 {ECO:0000313|EMBL:AEA26364.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="
hydantoinase n=1 Tax=Nonomuraea coxensis RepID=UPI00036857A1
cn_combo_scaffold_1517_16
Rhodococcus sp. MEB064, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14346..15719)
DNA (1374bp) protein (458aa)
hypothetical protein n=1 Tax=Rhodococcus sp. 114MFTsu3.1 RepID=UPI0003613A88
Contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ18996.1}; TaxID=1587522 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. MEB064.
fumarate reductase/succinate dehydrogenase flavoprotein-like protein
cn_combo_scaffold_1517_17
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15716..16357)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00035C52CB
Hydantoin racemase {ECO:0000313|EMBL:KID30748.1}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
hypothetical protein
cn_combo_scaffold_1517_18
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16339..17667)
DNA (1329bp) protein (443aa)
Uncharacterized protein involved in propionate catabolism n=1 Tax=Saccharomonospora glauca K62 RepID=I1D0K3_9PSEU
Uncharacterized protein involved in propionate catabolism {ECO:0000313|EMBL:KID30747.1}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="
prpD; MmgE/PrpD rbh
cn_combo_scaffold_1517_19
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17667..18365)
DNA (699bp) protein (233aa)
ABC transporter-like protein n=1 Tax=Saccharomonospora azurea SZMC 14600 RepID=H0K888_9PSEU
ABC transporter-like protein {ECO:0000313|EMBL:EHK85274.1}; TaxID=1114959 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora azure
livF; branched-chain amino acid ABC transporter, ATP-binding component
cn_combo_scaffold_1517_20
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18352..19086)
DNA (735bp) protein (245aa)
branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0003600B9B
livG; ABC transporter-like protein
ABC transporter-like protein {ECO:0000313|EMBL:AIJ21400.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 2
cn_combo_scaffold_1517_21
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19083..20129)
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000365E11C
Inner-membrane translocator {ECO:0000313|EMBL:EHK85276.1}; TaxID=1114959 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora azurea
livM; inner-membrane translocator
cn_combo_scaffold_1517_22
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20129..21061)
DNA (933bp) protein (311aa)
ABC transporter permease n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026281C4
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:AIJ21398.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 23
cn_combo_scaffold_1517_23
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21341..22237
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Streptomyces sulphureus RepID=UPI0003722DC7
Transcriptional regulator {ECO:0000313|EMBL:EXG81614.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;
IclR family transcriptional regulator
cn_combo_scaffold_1517_24
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22234..23430
DNA (1197bp) protein (399aa)
Putative acyl-CoA transferase/carnitine dehydratase n=1 Tax=Saccharomonospora glauca K62 RepID=I1D0J8_9PSEU
Putative acyl-CoA transferase/carnitine dehydratase {ECO:0000313|EMBL:EIE98472.1}; Flags: Precursor;; TaxID=928724 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomon
L-carnitine dehydratase/bile acid-inducible protein F
cn_combo_scaffold_1517_25
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

23420..24739
DNA (1320bp) protein (440aa)
Cytochrome P450 CYP254 n=1 Tax=Rhodococcus sp. (strain RHA1) RepID=Q0SJM7_RHOSR
cytochrome P450 Tax=RBG_16_RIF_CHLX_72_14_curated
cytochrome P450
cn_combo_scaffold_1517_26
unknown

Not on your lists

24736..24933
DNA (198bp) protein (66aa)

This feature has no annotations

cn_combo_scaffold_1517_27
unknown

Not on your lists

24894..25325
DNA (432bp) protein (144aa)

This feature has no annotations

cn_combo_scaffold_1517_28
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25384..26649
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Streptomyces sp. FxanaD5 RepID=UPI00037222FE
Uncharacterized protein {ECO:0000313|EMBL:EPD64221.1}; TaxID=1078086 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
cn_combo_scaffold_1517_29
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26649..27860
DNA (1212bp) protein (404aa)
2-methylcitrate dehydratase n=1 Tax=Amycolatopsis balhimycina RepID=UPI000363C9A3
Uncharacterized protein {ECO:0000313|EMBL:GAK69864.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein
cn_combo_scaffold_1517_30
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27925..29184
DNA (1260bp) protein (420aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000380997E
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:EXG81615.1}; Flags: Precursor;; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiacea
extracellular ligand-binding receptor rbh
Displaying items 1-30 of 35 in total

View Taxonomy