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cn_combo_scaffold_2487

Alias: PSE87_368

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2487_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2..1030
DNA (1029bp) protein (343aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS0
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D168_PSEUX
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
cn_combo_scaffold_2487_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1095..1964
DNA (870bp) protein (290aa)
GCN5-related N-acetyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D167_PSEUX
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEA26855.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxaniv
cn_combo_scaffold_2487_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2056..3870
DNA (1815bp) protein (605aa)
Penicillin-binding protein transpeptidase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D166_PSEUX
penicillin-binding protein transpeptidase
Penicillin-binding protein transpeptidase {ECO:0000313|EMBL:AEA26854.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia
cn_combo_scaffold_2487_4
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3887..4786)
DNA (900bp) protein (300aa)
Peptidase C60 sortase A and B n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F2P5_MODMB
Putative secreted protein {ECO:0000313|EMBL:EWC60996.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospon
peptidase C60 sortase A and B
cn_combo_scaffold_2487_5
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5178..6035)
DNA (858bp) protein (286aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SEP4_GEOOG
LPXTG-motif cell wall anchor domain-containing protein
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:ADB76680.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geoderma
cn_combo_scaffold_2487_6
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6125..7861)
DNA (1737bp) protein (579aa)
Uncharacterized protein n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F2P3_MODMB
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:CCH89906.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain
cn_combo_scaffold_2487_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7868..8836)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CU04_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23412.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_2487_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9339..9797
DNA (459bp) protein (153aa)
Putative transmembrane protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D165_PSEUX
transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:AEA26853.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudo
cn_combo_scaffold_2487_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9816..10388)
DNA (573bp) protein (191aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D163_PSEUX
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein {ECO:0000313|EMBL:AEA26851.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" so
cn_combo_scaffold_2487_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10397..11254)
DNA (858bp) protein (286aa)
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
Methionine aminopeptidase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D164_PSEUX
cn_combo_scaffold_2487_11
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(11288..11455)
DNA (168bp) protein (56aa)
Uncharacterized protein {ECO:0000313|EMBL:BAN03285.1}; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter cocc
cn_combo_scaffold_2487_12
unknown

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11545..11694
DNA (150bp) protein (50aa)

This feature has no annotations

cn_combo_scaffold_2487_13
unknown

Not on your lists

11691..11843
DNA (153bp) protein (51aa)

This feature has no annotations

cn_combo_scaffold_2487_14
unknown

Not on your lists

comp(11899..12099)
DNA (201bp) protein (67aa)

This feature has no annotations

cn_combo_scaffold_2487_15
unknown

Not on your lists

comp(12096..12365)
DNA (270bp) protein (90aa)

This feature has no annotations

cn_combo_scaffold_2487_16
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12352..12717)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Pseudoclavibacter faecalis RepID=UPI0003757061
Uncharacterized protein {ECO:0000313|EMBL:CCH77738.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
cn_combo_scaffold_2487_17
unknown

Not on your lists

13188..13496
DNA (309bp) protein (103aa)

This feature has no annotations

cn_combo_scaffold_2487_18
unknown

Not on your lists

comp(13493..13696)
DNA (204bp) protein (68aa)

This feature has no annotations

cn_combo_scaffold_2487_19
unknown

Not on your lists

comp(13693..13947)
DNA (255bp) protein (85aa)

This feature has no annotations

cn_combo_scaffold_2487_20
unknown

Not on your lists

comp(13947..14132)
DNA (186bp) protein (62aa)

This feature has no annotations

cn_combo_scaffold_2487_21
Emiliania huxleyi, Emiliania, Isochrysidales, Eukaryota

Not on your lists

comp(14135..14773)
DNA (639bp) protein (213aa)
Uncharacterized protein (Fragment) n=1 Tax=Emiliania huxleyi CCMP1516 RepID=R1D596_EMIHU
Uncharacterized protein {ECO:0000313|EMBL:EOD06056.1, ECO:0000313|EnsemblProtists:EOD06056}; Flags: Fragment;; TaxID=280463 species="Eukaryota; Haptophyceae; Isochrysidales; Noelaerhabdaceae; Emiliani
cn_combo_scaffold_2487_22
unknown

Not on your lists

comp(14951..15334)
DNA (384bp) protein (128aa)

This feature has no annotations

cn_combo_scaffold_2487_23
unknown

Not on your lists

comp(15331..15732)
DNA (402bp) protein (134aa)

This feature has no annotations

cn_combo_scaffold_2487_24
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15735..18926)
DNA (3192bp) protein (1064aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000376FB4C
hypothetical protein
Phage tail length tape-measure protein {ECO:0000313|EMBL:AIY15849.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (
cn_combo_scaffold_2487_25
unknown

Not on your lists

comp(18923..19099)
DNA (177bp) protein (59aa)

This feature has no annotations

cn_combo_scaffold_2487_26
unknown

Not on your lists

comp(19555..19758)
DNA (204bp) protein (68aa)

This feature has no annotations

cn_combo_scaffold_2487_27
unknown

Not on your lists

comp(19755..20729)
DNA (975bp) protein (325aa)

This feature has no annotations

cn_combo_scaffold_2487_28
unknown

Not on your lists

comp(20986..21180)
DNA (195bp) protein (65aa)

This feature has no annotations

cn_combo_scaffold_2487_29
unknown

Not on your lists

comp(21177..21473)
DNA (297bp) protein (99aa)

This feature has no annotations

cn_combo_scaffold_2487_30
unknown

Not on your lists

comp(21470..21841)
DNA (372bp) protein (124aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

View Taxonomy