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cn_combo_scaffold_3083

Alias: PSE87_372

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3083_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1..912
DNA (912bp) protein (304aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=675635 species="Bacteria; Actinobacter
DNA primase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYN6_PSEUX
DNA primase
cn_combo_scaffold_3083_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

912..1436
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYN5_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26605.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_3083_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1433..2188
DNA (756bp) protein (252aa)
trans-aconitate 2-methyltransferase (EC:2.1.1.144)
Trans-aconitate 2-methyltransferase {ECO:0000313|EMBL:AEA26604.1}; EC=2.1.1.144 {ECO:0000313|EMBL:AEA26604.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; P
Trans-aconitate 2-methyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYN4_PSEUX
cn_combo_scaffold_3083_4
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2185..2805)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI00037C9041
SMC domain-containing protein
SMC domain-containing protein {ECO:0000313|EMBL:AIJ22325.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica
cn_combo_scaffold_3083_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2955..3164)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYN3_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26603.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_3083_trna_1
unknown

Not on your lists

3318..3390
DNA (73bp)
transferRNA
cn_combo_scaffold_3083_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3538..4140)
DNA (603bp) protein (201aa)
Regulatory protein TetR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CY32_PSEUX
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:AEA24273.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_3083_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4214..4564
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CY33_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24274.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_3083_8
Streptomyces sp. MBRL 10, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4584..4862
DNA (279bp) protein (93aa)
Uncharacterized protein {ECO:0000313|EMBL:KIX77648.1}; TaxID=1592727 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MBRL 10.;"
cn_combo_scaffold_3083_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4871..6316)
DNA (1446bp) protein (482aa)
HNH endonuclease n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPM0_PSEUX
HNH endonuclease rbh
HNH endonuclease {ECO:0000313|EMBL:AEA25137.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain AT
cn_combo_scaffold_3083_10
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6796..7845
DNA (1050bp) protein (350aa)
ABC-type siderophore transporter, permease subunit n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JVZ1_SACES
ABC-type Fe3+-siderophore transport system, permease component {ECO:0000313|EMBL:EWC59540.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;"
ABC-type siderophore transporter, permease subunit rbh
cn_combo_scaffold_3083_11
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7842..8885
DNA (1044bp) protein (348aa)
ABC-type siderophore transporter, permease subunit n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JZD6_SACES
ABC-type Fe3+-siderophore transport system, permease 2 component {ECO:0000313|EMBL:EWC59541.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.
ABC-type siderophore transporter, permease subunit rbh
cn_combo_scaffold_3083_12
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8897..9769
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Streptomyces sp. AA0539 RepID=UPI00030CB9D9
ABC-type Fe3+-siderophore transport system, ATPase component {ECO:0000313|EMBL:EWC59542.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" s
ABC transporter-like protein
cn_combo_scaffold_3083_13
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9766..10761
DNA (996bp) protein (332aa)
ABC-type siderophore transporter,substrate-binding lipoprotein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JQI9_SACES
ABC-type siderophore transporter,substrate-binding lipoprotein rbh
ABC-type siderophore transporter,substrate-binding lipoprotein {ECO:0000313|EMBL:CCH29610.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" s
cn_combo_scaffold_3083_14
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10830..12041)
DNA (1212bp) protein (404aa)
Salicylate hydroxylase {ECO:0000313|EMBL:CEL12785.1}; EC=1.14.13.1 {ECO:0000313|EMBL:CEL12785.1};; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporang
hypothetical protein n=1 Tax=Bacillus endophyticus RepID=UPI0002F14A6F
monooxygenase FAD-binding protein
cn_combo_scaffold_3083_15
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12128..12748)
DNA (621bp) protein (207aa)
TetR family transcriptional regulator n=1 Tax=Serinicoccus profundi RepID=UPI000255E543
TetR family transcriptional regulator {ECO:0000313|EMBL:KIC69399.1}; TaxID=361575 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivor
TetR family transcriptional regulator
cn_combo_scaffold_3083_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12777..13703)
DNA (927bp) protein (309aa)
Putative F420-dependent oxidoreductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYM1_PSEUX
F420-dependent oxidoreductase rbh
Putative F420-dependent oxidoreductase {ECO:0000313|EMBL:AEA26591.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
cn_combo_scaffold_3083_17
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13771..15411)
DNA (1641bp) protein (547aa)
FAD dependent oxidoreductase n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SE70_GEOOG
FAD dependent oxidoreductase rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:ADB74542.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscur
cn_combo_scaffold_3083_18
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15505..17277)
DNA (1773bp) protein (591aa)
GAF modulated sigma54 specific transcriptional regulator, Fis family n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SE69_GEOOG
GAF modulated sigma54 specific Fis family transcriptional regulator rbh
GAF modulated sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:ADB74541.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatop
cn_combo_scaffold_3083_19
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17413..18474
DNA (1062bp) protein (354aa)
Homoserine O-acetyltransferase {ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00276255};; EC=2.3.1.31 {ECO:0000256|SAAS:SAAS00070942};; TaxID=882083 species="Bacteria; Actinobacteri
Homoserine acetyltransferase n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X755_9PSEU
alpha/beta hydrolase fold protein rbh
cn_combo_scaffold_3083_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18559..19578
DNA (1020bp) protein (340aa)
alkanal monooxygenase n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00035FC6CC
luciferase-like protein
Luciferase-like, subgroup {ECO:0000313|EMBL:AEA23230.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (
cn_combo_scaffold_3083_21
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19579..20064)
DNA (486bp) protein (162aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhod
alkylhydroperoxidase n=1 Tax=Rhodococcus opacus RepID=UPI00029CD461
Uncharacterized protein ydfG
cn_combo_scaffold_3083_22
Streptomyces gancidicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20205..21080
DNA (876bp) protein (292aa)
Sigma factor, sigma 70 type, group 4 (ECF) n=1 Tax=Streptomyces gancidicus BKS 13-15 RepID=M3BYB2_9ACTO
Sigma factor, sigma 70 type, group 4 (ECF) {ECO:0000313|EMBL:EMF29054.1}; TaxID=1284664 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces gan
ECF subfamily RNA polymerase sigma-24 subunit
cn_combo_scaffold_3083_23
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21086..21754)
DNA (669bp) protein (223aa)
Transcriptional regulator, GntR family n=1 Tax=Frankia sp. EUN1f RepID=D3D234_9ACTO
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EFC83002.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
GntR family transcriptional regulator
cn_combo_scaffold_3083_24
Streptomyces clavuligerus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21841..23313)
DNA (1473bp) protein (491aa)
Amidase {ECO:0000313|EMBL:EFG07050.1}; EC=6.3.5.6 {ECO:0000313|EMBL:EFG07050.1};; TaxID=443255 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomy
Amidase n=1 Tax=Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) RepID=E2Q4L2_STRC2
amidase family protein
cn_combo_scaffold_3083_25
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23313..24428)
DNA (1116bp) protein (372aa)
Aspartate aminotransferase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TTU9_TISMK
aspartate aminotransferase
Aspartate aminotransferase {ECO:0000313|EMBL:AFK56187.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobi
cn_combo_scaffold_3083_26
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24425..25564)
DNA (1140bp) protein (380aa)
Peptidase dimerization domain protein n=1 Tax=Frankia sp. EUN1f RepID=D3D228_9ACTO
Peptidase dimerization domain protein {ECO:0000313|EMBL:EFC82996.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
hypothetical protein
Displaying 27 items

View Taxonomy