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cn_combo_scaffold_4150

Alias: PSE87_377

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_4150_1
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..630)
DNA (630bp) protein (210aa)
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:ADI08597.1}; EC=6.1.1.12 {ECO:0000313|EMBL:ADI08597.1};; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;"
Aspartate--tRNA ligase n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7CAN0_STRBB
aspS; aspartyl-tRNA synthetase
cn_combo_scaffold_4150_2
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

778..1356
DNA (579bp) protein (193aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC
Tryptophan--tRNA ligase n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q3V2_KRIFD
cn_combo_scaffold_4150_3
unknown

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1573..1683
DNA (111bp) protein (37aa)

This feature has no annotations

cn_combo_scaffold_4150_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1881..3449
DNA (1569bp) protein (523aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CP71_PSEUX
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEA23630.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
cn_combo_scaffold_4150_5
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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3554..4951
DNA (1398bp) protein (466aa)
Amidohydrolase-family protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VTQ4_9ACTO
amidohydrolase-family protein rbh
Amidohydrolase-family protein {ECO:0000313|EMBL:AGZ39070.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DS
cn_combo_scaffold_4150_6
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5083..5268
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000362FA5D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJK45955.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Noc
cn_combo_scaffold_4150_7
unknown

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6636..6785
DNA (150bp) protein (50aa)

This feature has no annotations

cn_combo_scaffold_4150_8
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6898..7281)
DNA (384bp) protein (128aa)
membrane protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B2FEB9
Uncharacterized protein {ECO:0000313|EMBL:ERK72259.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC
hypothetical protein
cn_combo_scaffold_4150_9
Agromyces italicus, Agromyces, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

7561..8097
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Agromyces italicus RepID=UPI0003B45E29
cn_combo_scaffold_4150_10
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8103..8831
DNA (729bp) protein (243aa)
Putative uncharacterized protein n=1 Tax=Gordonia araii NBRC 100433 RepID=G7H1C3_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH18984.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
cn_combo_scaffold_4150_11
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8831..9694
DNA (864bp) protein (288aa)
Putative hydrolase n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2PCK1_9PSEU
Alpha/beta hydrolase fold {ECO:0000313|EMBL:CEL19980.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126
hypothetical protein rbh
cn_combo_scaffold_4150_12
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10242..10580)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Rhodococcus ruber RepID=UPI00037C445F
Uncharacterized protein {ECO:0000313|EMBL:EWT02865.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-2447
LuxR family transcriptional regulator
cn_combo_scaffold_4150_13
Streptomyces sp. Tu 6176, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10682..11710
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Streptomyces sp. PsTaAH-124 RepID=UPI00036BD8D0
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYT81174.1}; TaxID=1470557 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Tu 6176.;"
cn_combo_scaffold_4150_14
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11888..12895
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Rhodococcus opacus RepID=UPI00029CC71B
Fe(3+)-citrate-binding protein yfmC
Fe(3+)-citrate-binding protein yfmC {ECO:0000313|EMBL:AHK34029.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
cn_combo_scaffold_4150_15
Streptomyces pluripotens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13220..13402
DNA (183bp) protein (61aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1355015 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" so
Uncharacterized protein n=1 Tax=Mycobacterium abscessus V06705 RepID=S9ZLB8_MYCAB
DNA modification methylase
cn_combo_scaffold_4150_16
unknown

Not on your lists

13529..14023
DNA (495bp) protein (165aa)

This feature has no annotations

cn_combo_scaffold_4150_trna_1
unknown

Not on your lists

comp(14039..14111)
DNA (73bp)
transferRNA
cn_combo_scaffold_4150_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14154..15284)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CP22_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23058.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
Displaying 18 items

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