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cn_combo_scaffold_4449

Alias: PSE87_378

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_4449_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2..364
DNA (363bp) protein (121aa)
50S ribosomal protein L20 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLG8_PSEUX
50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" sou
cn_combo_scaffold_4449_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

373..1197
DNA (825bp) protein (275aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLG7_PSEUX
tRNA/rRNA methyltransferase SpoU rbh
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:AEA26009.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxan
cn_combo_scaffold_4449_3
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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comp(1143..1919)
DNA (777bp) protein (259aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LSK2_ACIC1
HAD family hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:ABK52412.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus
cn_combo_scaffold_4449_4
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(1916..3040)
DNA (1125bp) protein (375aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LSK1_ACIC1
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:KHD73957.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;
cn_combo_scaffold_4449_5
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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comp(3037..3987)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LSK0_ACIC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK52410.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC
cn_combo_scaffold_4449_6
unknown

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comp(3984..4664)
DNA (681bp) protein (227aa)

This feature has no annotations

cn_combo_scaffold_4449_7
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4657..5223)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LSJ9_ACIC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK52409.1}; Flags: Precursor;; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulol
cn_combo_scaffold_4449_8
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5220..6644)
DNA (1425bp) protein (475aa)
Glycosyl transferase, family 2 n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LSJ8_ACIC1
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABK52408.1}; Flags: Precursor;; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus c
cn_combo_scaffold_4449_9
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6641..7366)
DNA (726bp) protein (242aa)
LmbE family protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LSJ7_ACIC1
LmbE family protein
LmbE family protein {ECO:0000313|EMBL:ABK52407.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 430
cn_combo_scaffold_4449_10
Caenorhabditis elegans, Caenorhabditis, Rhabditida, Chromadorea, Nematoda, Metazoa

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7532..8404
DNA (873bp) protein (291aa)
Protein CLEC-122 n=1 Tax=Caenorhabditis elegans RepID=Q9TYL3_CAEEL
hypothetical protein
CLEC-122 {ECO:0000313|EMBL:CCD61979.1}; TaxID=6239 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.;" source="Caenorha
cn_combo_scaffold_4449_11
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8537..9211
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00038238DD
Putative two-component system response regulator {ECO:0000313|EMBL:EWC60993.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actin
two-component system response regulator
cn_combo_scaffold_4449_12
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9307..10113
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00036771CA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAM03181.1}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (
cn_combo_scaffold_4449_13
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10110..10784
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00036686CC
Nitrate/nitrite response regulator protein {ECO:0000313|EMBL:EWC60997.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineo
two component LuxR family transcriptional regulator
cn_combo_scaffold_4449_14
unknown

Not on your lists

10774..12108
DNA (1335bp) protein (445aa)

This feature has no annotations

cn_combo_scaffold_4449_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


12133..13194
DNA (1062bp) protein (354aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLG6_PSEUX
Phenylalanyl-tRNA synthetase subunit alpha
Displaying 15 items

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