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cn_combo_scaffold_881

Alias: PSE87_3

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_881_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..916
DNA (915bp) protein (305aa)
ABC-type transporter, periplasmic subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNP3_PSEUX
ABC transporter substrate-binding protein
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AEA22356.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" sou
cn_combo_scaffold_881_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

913..1854
DNA (942bp) protein (314aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNP4_PSEUX
ABC transporter permease rbh
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEA22357.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudono
cn_combo_scaffold_881_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1851..2699
DNA (849bp) protein (283aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNP5_PSEUX
ABC transporter permease rbh
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEA22358.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudono
cn_combo_scaffold_881_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2696..4075
DNA (1380bp) protein (460aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:AEA22359.1}; EC=3.6.3.17 {ECO:0000313|EMBL:AEA22359.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pse
Monosaccharide-transporting ATPase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNP6_PSEUX
cn_combo_scaffold_881_5
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4107..4349)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Frankia sp. CN3 RepID=G6H6K7_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP83411.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
cn_combo_scaffold_881_6
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4652..5752)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B2U8_FRADG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH08930.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
cn_combo_scaffold_881_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5900..7078)
DNA (1179bp) protein (393aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKI2_PSEUX
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEA22952.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
cn_combo_scaffold_881_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7330..8631
DNA (1302bp) protein (434aa)
Peptidase M23 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKI3_PSEUX
peptidase M23 rbh
Peptidase M23 {ECO:0000313|EMBL:AEA22953.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxaniv
cn_combo_scaffold_881_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8646..9188
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKI4_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22954.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_881_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9189..9482)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKI5_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22955.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_881_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9676..9978)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKI6_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22956.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_881_12
unknown

Not on your lists

comp(10453..10677)
DNA (225bp) protein (75aa)

This feature has no annotations

cn_combo_scaffold_881_13
Kitasatospora griseola, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10714..11439)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4N8K4_KITSK
Kitasatospora griseola strain MF730-N6 RKJC_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ63820.1}; TaxID=2064 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatos
hypothetical protein
cn_combo_scaffold_881_14
unknown

Not on your lists

comp(11831..12409)
DNA (579bp) protein (193aa)

This feature has no annotations

cn_combo_scaffold_881_15
unknown

Not on your lists

12840..13058
DNA (219bp) protein (73aa)

This feature has no annotations

cn_combo_scaffold_881_16
unknown

Not on your lists

13069..13215
DNA (147bp) protein (49aa)

This feature has no annotations

cn_combo_scaffold_881_17
unknown

Not on your lists

13356..13487
DNA (132bp) protein (44aa)

This feature has no annotations

cn_combo_scaffold_881_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13561..14478)
DNA (918bp) protein (306aa)
Transcriptional regulator, LysR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKI7_PSEUX
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEA22957.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
cn_combo_scaffold_881_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14598..15668
DNA (1071bp) protein (357aa)
tartrate dehydrogenase (EC:4.1.1.73)
Tartrate dehydrogenase {ECO:0000313|EMBL:AEA22958.1}; EC=4.1.1.73 {ECO:0000313|EMBL:AEA22958.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.
Tartrate dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKI8_PSEUX
cn_combo_scaffold_881_20
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15742..16221
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDBD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAM02321.1}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (
cn_combo_scaffold_881_21
unknown

Not on your lists

16817..16990
DNA (174bp) protein (58aa)

This feature has no annotations

cn_combo_scaffold_881_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17001..17822)
DNA (822bp) protein (274aa)
Ribonuclease BN n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTD0_PSEUX
ribonuclease BN
Ribonuclease BN {ECO:0000313|EMBL:AEA27355.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATC
cn_combo_scaffold_881_23
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17803..18969)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K314_SACES
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCH31982.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strai
cn_combo_scaffold_881_24
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19050..19397)
DNA (348bp) protein (116aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L6W1_9ACTO
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR64215.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr
bifunctional deaminase-reductase domain-containing protein
cn_combo_scaffold_881_25
Nocardia asteroides, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19584..20546)
DNA (963bp) protein (321aa)
hydroxymethylglutaryl-CoA lyase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE1D2
Putative hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:GAD86645.1}; TaxID=1110697 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia asteroides NBRC 1
putative hydroxymethylglutaryl-CoA lyase
cn_combo_scaffold_881_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20543..21583)
DNA (1041bp) protein (347aa)
formyl-CoA transferase (EC:2.8.3.16)
Formyl-CoA transferase {ECO:0000313|EMBL:AEA27106.1}; EC=2.8.3.16 {ECO:0000313|EMBL:AEA27106.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.
Formyl-CoA transferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CN82_PSEUX
cn_combo_scaffold_881_27
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21773..22000)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Rhodococcus RepID=UPI0003806043
Gnt-II system L-idonate transporter
Gluconate permease {ECO:0000313|EMBL:EKT82869.1}; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
cn_combo_scaffold_881_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22818..23138
DNA (321bp) protein (107aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNU8_PSEUX
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AEA22560.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
cn_combo_scaffold_881_29
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23543..24412)
DNA (870bp) protein (290aa)
amidohydrolase n=1 Tax=Desulfitobacterium sp. PCE1 RepID=UPI00036B4706
TIM-barrel fold metal-dependent hydrolase
Putative TIM-barrel fold metal-dependent hydrolase {ECO:0000313|EMBL:AFL99219.1}; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="D
cn_combo_scaffold_881_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24571..26085
DNA (1515bp) protein (505aa)
ABC transporter substrate-binding protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF1F7
ABC transporter substrate-binding protein
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AEA22356.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" sou
Displaying items 1-30 of 77 in total

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