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cn_combo_scaffold_1542

Alias: PSE87_7

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1542_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..1209
DNA (1209bp) protein (403aa)
Parallel beta-helix repeat protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR41_PSEUX
parallel beta-helix repeat-containing protein
Parallel beta-helix repeat protein {ECO:0000313|EMBL:AEA24099.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxan
cn_combo_scaffold_1542_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1269..2756)
DNA (1488bp) protein (496aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;"
Histidine kinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR39_PSEUX
histidine kinase rbh
cn_combo_scaffold_1542_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2861..3394)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR38_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24096.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_1542_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3384..3623)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR37_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24095.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_1542_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3866..4699
DNA (834bp) protein (278aa)
Glucose-1-phosphate cytidylyltransferase (EC:2.7.7.33) rbh
Glucose-1-phosphate cytidylyltransferase {ECO:0000313|EMBL:AEA24094.1}; EC=2.7.7.33 {ECO:0000313|EMBL:AEA24094.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiacea
Glucose-1-phosphate cytidylyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR36_PSEUX
cn_combo_scaffold_1542_6
Metarhizium anisopliae, Metarhizium, Hypocreales, Hypocreomycetidae, Ascomycota, Fungi

Not on your lists

comp(4783..5910)
DNA (1128bp) protein (376aa)
Genomic scaffold, msy_sf_11 pseudogene n=1 Tax=Malassezia sympodialis (strain ATCC 42132) RepID=M5EBM0_MALS4
Major outer envelope glycoprotein-like protein {ECO:0000313|EMBL:KID71659.1}; Flags: Fragment;; TaxID=1276135 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreom
cn_combo_scaffold_1542_7
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6237..7769)
DNA (1533bp) protein (511aa)
Putative polysaccharide biosynthesis protein n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1AY46_RHOOB
Putative polysaccharide biosynthesis protein {ECO:0000313|EMBL:GAF50717.1}; TaxID=1219028 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratisl
polysaccharide biosynthesis protein
cn_combo_scaffold_1542_8
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7772..9118)
DNA (1347bp) protein (449aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 141 RepID=UPI0003648DBC
GDP-mannose 6-dehydrogenase rbh
GDP-mannose 6-dehydrogenase {ECO:0000313|EMBL:AHC27491.1}; TaxID=700508 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum VKM Ac-1
cn_combo_scaffold_1542_9
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9194..10402)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 PF4_9BRAD">RepID=U1IPF4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF84614.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
group 1 glycosyl transferase
cn_combo_scaffold_1542_10
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10418..11452)
DNA (1035bp) protein (345aa)
glycosyltransferase (EC:2.4.-.-)
Putative glycosyltransferase {ECO:0000313|EMBL:BAH54042.1}; EC=2.4.-.- {ECO:0000313|EMBL:BAH54042.1};; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" s
Putative glycosyltransferase n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1AY47_RHOOB
cn_combo_scaffold_1542_11
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11575..13668)
DNA (2094bp) protein (698aa)
Uncharacterized protein n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1AY56_RHOOB
Uncharacterized protein {ECO:0000313|EMBL:GAF50727.1}; TaxID=1219028 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.
hypothetical protein
cn_combo_scaffold_1542_12
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13773..15110
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1AY55_RHOOB
Uncharacterized protein {ECO:0000313|EMBL:GAF50726.1}; TaxID=1219028 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.
hypothetical protein rbh
cn_combo_scaffold_1542_13
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15107..16405
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1AY54_RHOOB
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAH54049.1}; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
cn_combo_scaffold_1542_14
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16388..17671)
DNA (1284bp) protein (428aa)
Putative glycosyltransferase {ECO:0000313|EMBL:CDZ91334.1}; EC=2.4.-.- {ECO:0000313|EMBL:CDZ91334.1};; TaxID=1830 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" sou
glycosyltransferase (EC:2.4.-.-) rbh
Glycosyltransferase n=1 Tax=Rhodococcus ruber BKS 20-38 RepID=M3A0M1_9NOCA
cn_combo_scaffold_1542_15
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17668..19929)
DNA (2262bp) protein (754aa)
glycosyltransferase (EC:2.4.-.-) rbh
Putative glycosyltransferase {ECO:0000313|EMBL:BAH54047.1}; EC=2.4.-.- {ECO:0000313|EMBL:BAH54047.1};; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" s
Putative glycosyltransferase n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1AY52_RHOOB
cn_combo_scaffold_1542_16
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19926..21389)
DNA (1464bp) protein (488aa)
Hypothetical membrane protein n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1AY50_RHOOB
hypothetical protein rbh
Hypothetical membrane protein {ECO:0000313|EMBL:BAH54045.1}; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
cn_combo_scaffold_1542_17
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21386..23044)
DNA (1659bp) protein (553aa)
Uncharacterized protein n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1AY49_RHOOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH54044.1}; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
cn_combo_scaffold_1542_18
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23302..24051
DNA (750bp) protein (250aa)
Acetyltransferase n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0EX98_9NOCA
Putative acetyltransferase {ECO:0000313|EMBL:GAJ84761.1}; TaxID=1206724 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis NBRC 14402.;"
acetyltransferase
cn_combo_scaffold_1542_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24061..25413)
DNA (1353bp) protein (451aa)
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000313|EMBL:AEA24079.1}; EC=5.4.3.8 {ECO:0000313|EMBL:AEA24079.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR21_PSEUX
cn_combo_scaffold_1542_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25432..26958)
DNA (1527bp) protein (509aa)
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:AEA24078.1}; EC=2.7.8.6 {ECO:0000313|EMBL:AEA24078.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonoc
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR20_PSEUX
cn_combo_scaffold_1542_21
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(27311..28429)
DNA (1119bp) protein (373aa)
glycosyltransferase (EC:2.4.-.-)
Putative glycosyltransferase n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1AY52_RHOOB
group 1 glycosyl transferase Tax=RBG_16_Actinobacteria_68_21_curated
cn_combo_scaffold_1542_22
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

comp(28805..29830)
DNA (1026bp) protein (342aa)
coenzyme F390 synthetase; K01912 phenylacetate-CoA ligase [EC:6.2.1.30] Tax=RBG_16_Caldithrix_48_16_curated
CapK protein putative n=1 Tax=Vibrio sp. RC341 RepID=C9Q827_9VIBR
capsule biosynthesis protein CapK
cn_combo_scaffold_1542_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30620..32017)
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR19_PSEUX
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA24077.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_1542_24
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32108..32497)
DNA (390bp) protein (130aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
Ribonuclease VapC n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JTE6_SACES
hypothetical protein
cn_combo_scaffold_1542_25
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32494..32766)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003634DC9
Predicted protein {ECO:0000313|EMBL:EFL06484.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
hypothetical protein
cn_combo_scaffold_1542_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32791..33384)
DNA (594bp) protein (198aa)
HNH endonuclease n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CR18_PSEUX
HNH endonuclease rbh
HNH endonuclease {ECO:0000313|EMBL:AEA24076.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain AT
Displaying 26 items

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