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cn_combo_scaffold_2098

Alias: PSE87_12

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2098_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..88)
DNA (87bp) protein (29aa)
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:AEA23970.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
cn_combo_scaffold_2098_2
unknown

Not on your lists

545..916
DNA (372bp) protein (124aa)

This feature has no annotations

cn_combo_scaffold_2098_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1207..2775)
DNA (1569bp) protein (523aa)
gluconate 2-dehydrogenase (EC:1.1.99.3)
Gluconate 2-dehydrogenase (Acceptor) {ECO:0000313|EMBL:AEA28109.1}; EC=1.1.99.3 {ECO:0000313|EMBL:AEA28109.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; P
Gluconate 2-dehydrogenase (Acceptor) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CK03_PSEUX
cn_combo_scaffold_2098_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2772..3212)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CK04_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28110.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_2098_5
unknown

Not on your lists

comp(3345..3479)
DNA (135bp) protein (45aa)

This feature has no annotations

cn_combo_scaffold_2098_6
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3535..4251)
DNA (717bp) protein (239aa)
GntR domain protein n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2NYK6_STRVO
GntR family transcriptional regulator
GntR domain protein {ECO:0000313|EMBL:AEM82073.1}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger Tu 4113.;"
cn_combo_scaffold_2098_7
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4997..6175
DNA (1179bp) protein (393aa)
hypothetical protein; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
Homocysteine methyltransferase protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2FT74_9GAMM
methionine synthase vitamin-B12 independent
cn_combo_scaffold_2098_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7020..7598)
DNA (579bp) protein (193aa)
NUDIX hydrolase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXH4_PSEUX
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AEA26548.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATC
cn_combo_scaffold_2098_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8535..9992)
DNA (1458bp) protein (486aa)
Amidase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D071_PSEUX
amidase
Amidase {ECO:0000313|EMBL:AEA25727.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486
cn_combo_scaffold_2098_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10331..12421
DNA (2091bp) protein (697aa)
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:AEA25728.1}; EC=3.5.2.9 {ECO:0000313|EMBL:AEA25728.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudo
5-oxoprolinase (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D072_PSEUX
cn_combo_scaffold_2098_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12447..14426
DNA (1980bp) protein (660aa)
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:AEA25729.1}; EC=3.5.2.9 {ECO:0000313|EMBL:AEA25729.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudo
5-oxoprolinase (EC:3.5.2.9) rbh
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D073_PSEUX
cn_combo_scaffold_2098_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14514..16850
DNA (2337bp) protein (779aa)
Acyl-homoserine-lactone acylase {ECO:0000313|EMBL:AEA25730.1}; EC=3.5.1.97 {ECO:0000313|EMBL:AEA25730.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudo
acyl-homoserine-lactone acylase (EC:3.5.1.97)
Acyl-homoserine-lactone acylase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D074_PSEUX
cn_combo_scaffold_2098_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16872..18116)
DNA (1245bp) protein (415aa)
Putative PucR family transcriptional regulator n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D075_PSEUX
PucR family transcriptional regulator rbh
Putative PucR family transcriptional regulator {ECO:0000313|EMBL:AEA25731.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonoc
cn_combo_scaffold_2098_14
Mycobacterium sinense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18145..18915
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI00037FE8A1
echA8_3; enoyl-CoA dehydratase EchA8_3
Enoyl-CoA dehydratase EchA8_3 {ECO:0000313|EMBL:AEF36174.1}; TaxID=875328 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain JDM
cn_combo_scaffold_2098_15
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19271..19888)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BI94_MYCCN
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFM17001.1}; TaxID=710421 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (strain NBB
cn_combo_scaffold_2098_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20761..21294)
DNA (534bp) protein (178aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae
histidine kinase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE1F5
histidine kinase
cn_combo_scaffold_2098_17
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21319..21960)
DNA (642bp) protein (214aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X650_NAKMY
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACV76821.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Naka
cn_combo_scaffold_2098_18
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22319..22687)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Saccharomonospora halophila RepID=UPI00036715D3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXU91627.1}; TaxID=1395572 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albulus PD-1.;"
cn_combo_scaffold_2098_19
unknown

Not on your lists

22866..23090
DNA (225bp) protein (75aa)

This feature has no annotations

cn_combo_scaffold_2098_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23137..24075)
DNA (939bp) protein (313aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNA8_PSEUX
alcohol dehydrogenase
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:AEA27132.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudo
cn_combo_scaffold_2098_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24134..25051)
DNA (918bp) protein (306aa)
NADPH:quinone reductase (EC:1.6.5.5) rbh
NADPH:quinone reductase {ECO:0000313|EMBL:AEA27133.1}; EC=1.6.5.5 {ECO:0000313|EMBL:AEA27133.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.
NADPH:quinone reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNA9_PSEUX
cn_combo_scaffold_2098_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25508..26113
DNA (606bp) protein (202aa)
Oxidoreductase molybdopterin binding protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNB0_PSEUX
oxidoreductase molybdopterin binding protein rbh
Oxidoreductase molybdopterin binding protein {ECO:0000313|EMBL:AEA27134.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocar
Displaying 22 items

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