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cn_combo_scaffold_2232

Alias: PSE87_17

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2232_1
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..1156
DNA (1155bp) protein (385aa)
Putative Aryl-alcohol dehydrogenase n=1 Tax=Streptomyces afghaniensis 772 RepID=S4MM68_9ACTO
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66267.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr
zinc-binding alcohol dehydrogenase
cn_combo_scaffold_2232_2
unknown

Not on your lists

comp(1164..1292)
DNA (129bp) protein (43aa)

This feature has no annotations

cn_combo_scaffold_2232_3
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1576..1926)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Rhodococcus rhodochrous RepID=UPI00036572B2
acyl esterase
Acyl esterase {ECO:0000313|EMBL:CCJ05483.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2)
cn_combo_scaffold_2232_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1991..3511)
DNA (1521bp) protein (507aa)
pentachlorophenol monooxygenase (EC:1.14.13.50)
Pentachlorophenol monooxygenase {ECO:0000313|EMBL:AEA22346.1}; EC=1.14.13.50 {ECO:0000313|EMBL:AEA22346.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseu
Pentachlorophenol monooxygenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLZ8_PSEUX
cn_combo_scaffold_2232_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3508..3999)
DNA (492bp) protein (164aa)
Membrane protein of uknown function UCP014873 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLZ7_PSEUX
hypothetical protein
Membrane protein of uknown function UCP014873 {ECO:0000313|EMBL:AEA22345.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonoca
cn_combo_scaffold_2232_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4133..6946)
DNA (2814bp) protein (938aa)
Transcriptional regulator, winged helix family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLZ6_PSEUX
Transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEA22344.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonoc
winged helix family transcriptional regulator rbh
cn_combo_scaffold_2232_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7014..7622)
DNA (609bp) protein (203aa)
FAD linked oxidase domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLZ5_PSEUX
FAD linked oxidase domain-containing protein
FAD linked oxidase domain protein {ECO:0000313|EMBL:AEA22343.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxani
cn_combo_scaffold_2232_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7671..8669)
DNA (999bp) protein (333aa)
Transposase IS111A/IS1328/IS1533 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVF8_PSEUX
transposase IS111A/IS1328/IS1533
Transposase IS111A/IS1328/IS1533 {ECO:0000313|EMBL:AEA23457.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxaniv
cn_combo_scaffold_2232_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8687..9826)
DNA (1140bp) protein (380aa)
FAD linked oxidase domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLZ5_PSEUX
FAD linked oxidase domain-containing protein
FAD linked oxidase domain protein {ECO:0000313|EMBL:AEA22343.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxani
cn_combo_scaffold_2232_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9962..11581
DNA (1620bp) protein (540aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLZ4_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22342.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_2232_11
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11671..12207
DNA (537bp) protein (179aa)
Putative secreted protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TNP1_9MICO
Putative secreted protein {ECO:0000313|EMBL:EAP98149.1}; TaxID=313589 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
deaminase-reductase domain-containing protein
cn_combo_scaffold_2232_12
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12215..12661
DNA (447bp) protein (149aa)
Uncharacterized protein n=2 Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=I7GGP0_MYCS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFP40717.1}; TaxID=246196 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis (strain ATC
cn_combo_scaffold_2232_13
unknown

Not on your lists

13138..13365
DNA (228bp) protein (76aa)
methylase involved in ubiquinone/menaquinone biosynthesis
cn_combo_scaffold_2232_14
unknown

Not on your lists

13510..13854
DNA (345bp) protein (115aa)

This feature has no annotations

cn_combo_scaffold_2232_15
unknown

Not on your lists

comp(14422..14952)
DNA (531bp) protein (177aa)

This feature has no annotations

cn_combo_scaffold_2232_16
Gordonia polyisoprenivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15048..17573)
DNA (2526bp) protein (842aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B763EB
LuxR family transcriptional regulator
Putative transcriptional regulator, LuxR family {ECO:0000313|EMBL:AFA74948.1}; TaxID=1112204 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia polyisopre
cn_combo_scaffold_2232_17
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17671..18231
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S8I8_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB75569.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (s
cn_combo_scaffold_2232_18
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18255..19526
DNA (1272bp) protein (424aa)
dipeptidyl aminopeptidase n=1 Tax=Rhodococcus sp. P14 RepID=UPI000299D949
Uncharacterized protein {ECO:0000313|EMBL:CDZ91639.1}; TaxID=1830 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber.;"
hypothetical protein
cn_combo_scaffold_2232_19
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19632..20111
DNA (480bp) protein (160aa)
Thioesterase superfamily protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S7K0_GEOOG
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ADB75459.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus ob
cn_combo_scaffold_2232_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20116..20400
DNA (285bp) protein (95aa)
Transcription activator effector binding protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYR2_PSEUX
transcription activator effector binding protein
Transcription activator effector binding protein {ECO:0000313|EMBL:AEA26632.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudon
cn_combo_scaffold_2232_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20485..21561
DNA (1077bp) protein (359aa)
malate dehydrogenase (EC:1.1.1.37)
Malate dehydrogenase {ECO:0000313|EMBL:AEA28426.1}; EC=1.1.1.37 {ECO:0000313|EMBL:AEA28426.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;"
Malate dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRY2_PSEUX
cn_combo_scaffold_2232_22
Burkholderia sp. RPE67, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21625..22437)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Mycobacterium avium RepID=UPI000364E9D1
uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:BAO91504.1}; TaxID=758796 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. R
cn_combo_scaffold_2232_23
unknown

Not on your lists

comp(22502..22705)
DNA (204bp) protein (68aa)

This feature has no annotations

cn_combo_scaffold_2232_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22808..23899
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRX7_PSEUX
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA28421.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_2232_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23986..24504)
DNA (519bp) protein (173aa)
peptide methionine sulfoxide reductase (EC:1.8.4.11) rbh
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRX6_PSEUX
cn_combo_scaffold_2232_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24746..25177)
DNA (432bp) protein (144aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRX5_PSEUX
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AEA28419.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseu
cn_combo_scaffold_2232_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25188..25607)
DNA (420bp) protein (140aa)
Transcriptional regulator, AraC family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRX4_PSEUX
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEA28418.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
cn_combo_scaffold_2232_28
Rhodococcus sp. AW25M09, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25669..27408)
DNA (1740bp) protein (580aa)
Putative DNA polymerase III n=1 Tax=Rhodococcus sp. AW25M09 RepID=L8DGG0_9NOCA
Putative DNA polymerase III {ECO:0000313|EMBL:CCQ15701.1}; TaxID=1268303 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AW25M09.;"
DNA polymerase III rbh
cn_combo_scaffold_2232_29
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27625..27912
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Rhodococcus rhodnii LMG 5362 RepID=R7WQ70_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:KJY30122.1}; TaxID=1609133 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
hypothetical protein
cn_combo_scaffold_2232_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27890..29008)
DNA (1119bp) protein (373aa)
L-threonine 3-dehydrogenase (EC:1.1.1.103)
L-threonine 3-dehydrogenase {ECO:0000313|EMBL:AEA26300.1}; EC=1.1.1.103 {ECO:0000313|EMBL:AEA26300.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonoc
L-threonine 3-dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT82_PSEUX
Displaying items 1-30 of 41 in total

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