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cn_combo_scaffold_3111

Alias: PSE87_30

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3111_1
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(113..385)
DNA (273bp) protein (91aa)
membrane protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B58C79
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
membrane protein
cn_combo_scaffold_3111_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(405..920)
DNA (516bp) protein (172aa)
GtrA family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVI5_PSEUX
GtrA family protein
GtrA family protein {ECO:0000313|EMBL:AEA23805.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
cn_combo_scaffold_3111_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1041..1583)
DNA (543bp) protein (181aa)
protocatechuate 3,4-dioxygenase subunit alpha (EC:1.13.11.3)
Protocatechuate 3,4-dioxygenase, alpha subunit {ECO:0000313|EMBL:AEA23804.1}; EC=1.13.11.3 {ECO:0000313|EMBL:AEA23804.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonoca
Protocatechuate 3,4-dioxygenase, alpha subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVI4_PSEUX
cn_combo_scaffold_3111_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1576..2283)
DNA (708bp) protein (236aa)
protocatechuate 3,4-dioxygenase subunit beta (EC:1.13.11.3) rbh
Protocatechuate 3,4-dioxygenase, beta subunit {ECO:0000313|EMBL:AEA23803.1}; EC=1.13.11.3 {ECO:0000313|EMBL:AEA23803.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocar
Protocatechuate 3,4-dioxygenase, beta subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVI3_PSEUX
cn_combo_scaffold_3111_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2280..3461)
DNA (1182bp) protein (394aa)
4-hydroxybenzoate 3-monooxygenase (EC:1.14.13.2)
4-hydroxybenzoate 3-monooxygenase {ECO:0000313|EMBL:AEA23802.1}; EC=1.14.13.2 {ECO:0000313|EMBL:AEA23802.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pse
4-hydroxybenzoate 3-monooxygenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVI2_PSEUX
cn_combo_scaffold_3111_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3530..4279
DNA (750bp) protein (250aa)
Transcriptional regulator, IclR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVI1_PSEUX
IclR family transcriptional regulator rbh
Transcriptional regulator, IclR family {ECO:0000313|EMBL:AEA23801.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
cn_combo_scaffold_3111_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4543..5394
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVI0_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23800.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
cn_combo_scaffold_3111_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5485..6771)
DNA (1287bp) protein (429aa)
CinA-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVH9_PSEUX
competence/damage-inducible protein CinA
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (stra
cn_combo_scaffold_3111_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(6838..7569)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FC64_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB53359.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
cn_combo_scaffold_3111_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7733..8392
DNA (660bp) protein (220aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVH7_PSEUX
LuxR family transcriptional regulator rbh
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEA23797.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pse
cn_combo_scaffold_3111_11
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8575..8961
DNA (387bp) protein (129aa)
PASTA domain containing protein n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AA55_THECD
PASTA domain containing protein
PASTA domain containing protein {ECO:0000313|EMBL:ACY96991.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curv
cn_combo_scaffold_3111_12
unknown

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9634..9822
DNA (189bp) protein (63aa)

This feature has no annotations

cn_combo_scaffold_3111_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10370..11980)
DNA (1611bp) protein (537aa)
Peptidase S1 and S6 chymotrypsin/Hap n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVH3_PSEUX
peptidase S1 and S6 chymotrypsin/Hap
Peptidase S1 and S6 chymotrypsin/Hap {ECO:0000313|EMBL:AEA23793.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="
cn_combo_scaffold_3111_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12128..14488)
DNA (2361bp) protein (787aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVG0_PSEUX
Uncharacterized protein {ECO:0000313|EMBL:AEA23780.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
hypothetical protein
cn_combo_scaffold_3111_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14481..16151)
DNA (1671bp) protein (557aa)
Histidine kinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CU60_PSEUX
histidine kinase rbh
Histidine kinase {ECO:0000313|EMBL:AEA23779.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain AT
cn_combo_scaffold_3111_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16148..16936)
DNA (789bp) protein (263aa)
phosphonate-transporting ATPase (EC:3.6.3.28) rbh
Phosphonate-transporting ATPase {ECO:0000313|EMBL:AEA23778.1}; EC=3.6.3.28 {ECO:0000313|EMBL:AEA23778.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudo
Phosphonate-transporting ATPase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CU59_PSEUX
cn_combo_scaffold_3111_17
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17320..17871
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1AUI6_RHOOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH49194.1}; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
cn_combo_scaffold_3111_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17882..18772)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CU58_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23777.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_3111_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18996..19424
DNA (429bp) protein (143aa)
Anti-sigma factor antagonist n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CU57_PSEUX
anti-sigma-factor antagonist
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivor
Displaying 19 items

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