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cn_combo_scaffold_3181

Alias: PSE87_33

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3181_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2..163
DNA (162bp) protein (54aa)
3-oxoacid CoA-transferase subunit B (EC:2.8.3.5)
3-oxoacid CoA-transferase, B subunit {ECO:0000313|EMBL:AEA24941.1}; EC=2.8.3.5 {ECO:0000313|EMBL:AEA24941.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Ps
3-oxoacid CoA-transferase, B subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJI9_PSEUX
cn_combo_scaffold_3181_2
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(205..957)
DNA (753bp) protein (251aa)
DltE n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003635610
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:ERK69488.1}; Flags: Fragment;; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; L
short-chain dehydrogenase/reductase
cn_combo_scaffold_3181_3
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1058..1903
DNA (846bp) protein (282aa)
DNA-binding protein n=1 Tax=Streptomyces sp. AA4 RepID=D9V9B4_9ACTO
DNA-binding protein {ECO:0000313|EMBL:EFL09683.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
XRE family transcriptional regulator rbh
cn_combo_scaffold_3181_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1887..3089)
DNA (1203bp) protein (401aa)
linalool 8-monooxygenase (EC:1.14.99.28)
Linalool 8-monooxygenase {ECO:0000313|EMBL:AEA24940.1}; EC=1.14.99.28 {ECO:0000313|EMBL:AEA24940.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocar
Linalool 8-monooxygenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJI8_PSEUX
cn_combo_scaffold_3181_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3115..4260)
DNA (1146bp) protein (382aa)
FAD dependent oxidoreductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJI7_PSEUX
FAD dependent oxidoreductase rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:AEA24939.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivoran
cn_combo_scaffold_3181_6
unknown

Not on your lists

4472..4690
DNA (219bp) protein (73aa)

This feature has no annotations

cn_combo_scaffold_3181_7
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4811..5860)
DNA (1050bp) protein (350aa)
ABC transporter related n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8L236_FRASN
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABW14696.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
cn_combo_scaffold_3181_8
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5857..7407)
DNA (1551bp) protein (517aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Frankia sp. EUN1f RepID=D3D8D2_9ACTO
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EFC80841.1}; Flags: Precursor;; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.
ABC transporter
cn_combo_scaffold_3181_9
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7404..8459)
DNA (1056bp) protein (352aa)
Extracellular solute-binding protein family 1 n=1 Tax=Frankia sp. EUN1f RepID=D3D8D3_9ACTO
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EFC80842.1}; Flags: Precursor;; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp.
iron ABC transporter substrate-binding protein
cn_combo_scaffold_3181_10
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8567..9184
DNA (618bp) protein (206aa)
Two component transcriptional regulator, LuxR family n=2 Tax=Frankia sp. EUN1f RepID=D3D9I5_9ACTO
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EFC80404.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
LuxR family transcriptional regulator
cn_combo_scaffold_3181_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9186..10577
DNA (1392bp) protein (464aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;"
Histidine kinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXS0_PSEUX
histidine kinase
cn_combo_scaffold_3181_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10561..11322
DNA (762bp) protein (254aa)
4'-phosphopantetheinyl transferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJI6_PSEUX
4'-phosphopantetheinyl transferase rbh
4'-phosphopantetheinyl transferase {ECO:0000313|EMBL:AEA24938.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxan
cn_combo_scaffold_3181_13
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11475..12209
DNA (735bp) protein (245aa)
Zn-dependent protease-like protein n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4SRU0_AMYOR
Zn-dependent protease-like protein rbh
Zn-dependent protease-like protein {ECO:0000313|EMBL:AGM06149.1}; TaxID=1156913 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orienta
cn_combo_scaffold_3181_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12220..13560)
DNA (1341bp) protein (447aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJI1_PSEUX
Na(+)/H(+) antiporter NhaA rbh
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudo
cn_combo_scaffold_3181_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13663..14151
DNA (489bp) protein (163aa)
DSBA oxidoreductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJI0_PSEUX
DSBA oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:AEA24932.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
cn_combo_scaffold_3181_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14239..15555
DNA (1317bp) protein (439aa)
DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=675635 species="Bacteria; Actinobacteria; Pse
DNA polymerase IV n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJH9_PSEUX
cn_combo_scaffold_3181_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15596..17344)
DNA (1749bp) protein (583aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|SAAS:SAAS00013344}; EC=2.4.2.21 {ECO:0000256|SAAS:SAAS00013328};; TaxID=675635 species="Bacteria; Actinobacteria; Ps
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJH8_PSEUX
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase rbh
cn_combo_scaffold_3181_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17341..17859)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJH7_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24929.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_3181_19
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18047..18607)
DNA (561bp) protein (187aa)
Phosphoglycerate mutase n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S768_GEOOG
phosphoglycerate mutase
Phosphoglycerate mutase {ECO:0000313|EMBL:ADB73368.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (s
cn_combo_scaffold_3181_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18615..19826)
DNA (1212bp) protein (404aa)
Uroporphyrin-III C-methyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJH6_PSEUX
uroporphyrin-III C-methyltransferase rbh
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:AEA24928.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia diox
cn_combo_scaffold_3181_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20032..20427)
DNA (396bp) protein (132aa)
Cobalamin (Vitamin B12) biosynthesis CbiG protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJH5_PSEUX
cobalamin (vitamin B12) biosynthesis protein CbiG
Cobalamin (Vitamin B12) biosynthesis CbiG protein {ECO:0000313|EMBL:AEA24927.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudo
cn_combo_scaffold_3181_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20424..21758)
DNA (1335bp) protein (445aa)
Hydrogenobyrinate a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; EC=6.3.5.9 {ECO:0000256|HAMAP-Rule:MF_00027};; Hydrogenobyrinic acid a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; T
Cobyrinic acid A,C-diamide synthase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJH4_PSEUX
cobyrinic acid A,C-diamide synthase rbh
cn_combo_scaffold_3181_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21752..22240)
DNA (489bp) protein (163aa)
cob(I)alamin adenosyltransferase (EC:2.5.1.17)
Cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:AEA24925.1}; EC=2.5.1.17 {ECO:0000313|EMBL:AEA24925.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseud
Cob(I)alamin adenosyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJH3_PSEUX
Displaying 23 items

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