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cn_combo_scaffold_3232

Alias: PSE87_36

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3232_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..330)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXN9_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA27622.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_3232_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

932..1483
DNA (552bp) protein (184aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
Adenylate kinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWC3_PSEUX
adenylate kinase
cn_combo_scaffold_3232_3
unknown

Not on your lists

comp(1470..1856)
DNA (387bp) protein (129aa)

This feature has no annotations

cn_combo_scaffold_3232_4
unknown

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comp(2174..2416)
DNA (243bp) protein (81aa)

This feature has no annotations

cn_combo_scaffold_3232_5
Rhodococcus aetherivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2930..3142
DNA (213bp) protein (71aa)
Acyl-CoA dehydrogenase n=1 Tax=Rhodococcus opacus M213 RepID=K8Y1J9_RHOOP
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AKE88231.1}; TaxID=191292 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus aetherivorans.;"
acyl-CoA dehydrogenase
cn_combo_scaffold_3232_6
unknown

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comp(3298..3954)
DNA (657bp) protein (219aa)

This feature has no annotations

cn_combo_scaffold_3232_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4528..4830
DNA (303bp) protein (101aa)
urease subunit gamma (EC:3.5.1.5)
Urease subunit gamma {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850};; Urea amidohydrolase subunit gamma {
Urease subunit gamma n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV58_PSEUX
cn_combo_scaffold_3232_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4830..5207
DNA (378bp) protein (126aa)
urease subunit beta (EC:3.5.1.5)
Urease subunit beta {ECO:0000256|HAMAP-Rule:MF_01954}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01954};; Urea amidohydrolase subunit beta {ECO:0000256|HAMAP-Rule:MF_01954}; TaxID=675635 species="Bacteria
Urease subunit beta n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV59_PSEUX
cn_combo_scaffold_3232_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5204..6922
DNA (1719bp) protein (573aa)
Urease subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01953, ECO:0000256|SAAS:SAAS00033844};; Urea amidohydrolase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953
urease subunit alpha (EC:3.5.1.5) rbh
Urease subunit alpha n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV60_PSEUX
cn_combo_scaffold_3232_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6922..7614
DNA (693bp) protein (231aa)
Putative urease accessory protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV61_PSEUX
urease accessory protein rbh
Putative urease accessory protein {ECO:0000313|EMBL:AEA28607.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxani
cn_combo_scaffold_3232_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7571..8362
DNA (792bp) protein (264aa)
Urease accessory protein UreG n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV62_PSEUX
urease accessory protein ureG rbh
Urease accessory protein UreG {ECO:0000256|HAMAP-Rule:MF_01389}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxani
cn_combo_scaffold_3232_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8363..9142
DNA (780bp) protein (260aa)
Urease accessory protein UreD n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV63_PSEUX
urease accessory protein ureD rbh
Urease accessory protein UreD {ECO:0000256|HAMAP-Rule:MF_01384}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxani
cn_combo_scaffold_3232_13
Propionibacterium propionicum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9635..11221
DNA (1587bp) protein (529aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI000381959B
ABC transporter substrate-binding protein
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:AFN47301.1}; TaxID=767029 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" sour
cn_combo_scaffold_3232_14
Propionibacterium propionicum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11223..12158
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00036A64B9
putative glutathione ABC transporter, permease protein GsiC
Putative glutathione ABC transporter, permease protein GsiC {ECO:0000313|EMBL:AFN46652.1}; TaxID=767029 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.
cn_combo_scaffold_3232_15
Propionibacterium propionicum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12155..13042
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00035C3644
putative D,D-dipeptide transport system permease protein DdpC
Putative D,D-dipeptide transport system permease protein DdpC {ECO:0000313|EMBL:AFN45648.1}; TaxID=767029 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacteriu
cn_combo_scaffold_3232_16

Not on your lists

13039..14505
DNA (1467bp) protein (489aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00035C41F8
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:AGC72503.1}; TaxID=1256559 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_2059.;"
ABC transporter ATP-binding protein
cn_combo_scaffold_3232_17
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14502..15203
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00037A3DDF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH31808.1}; TaxID=234621 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis (strain PR4 / NB
cn_combo_scaffold_3232_18
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15492..16829)
DNA (1338bp) protein (446aa)
GntR family transcriptional regulator n=1 Tax=Salinispora pacifica RepID=UPI00037C07BF
GntR family transcriptional regulator {ECO:0000313|EMBL:EST24237.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochr
GntR family transcriptional regulator rbh
cn_combo_scaffold_3232_19
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16909..17538
DNA (630bp) protein (210aa)
DJ-1/PfpI family protein n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6JX31_STRRC
AraC family transcriptional regulator rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:AJF67872.1}; TaxID=362257 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamen
Displaying 19 items

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