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cn_combo_scaffold_3996

Alias: PSE87_56

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3996_1
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(96..881)
DNA (786bp) protein (262aa)
type 11 methyltransferase n=1 Tax=Glaciibacter superstes RepID=UPI0003B498B6
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:AEE47312.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 /
cn_combo_scaffold_3996_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(878..2083)
DNA (1206bp) protein (402aa)
Monooxygenase FAD-binding protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT86_PSEUX
monooxygenase FAD-binding protein rbh
Monooxygenase FAD-binding protein {ECO:0000313|EMBL:AEA26304.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pse
cn_combo_scaffold_3996_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2218..5154)
DNA (2937bp) protein (979aa)
Transcriptional regulator, winged helix family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT85_PSEUX
Transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEA26303.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonoc
winged helix family transcriptional regulator rbh
cn_combo_scaffold_3996_4
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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5327..5647
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Mycobacterium tusciae JS617 RepID=H1JVU1_9MYCO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV80129.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700
cn_combo_scaffold_3996_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5644..6783)
DNA (1140bp) protein (380aa)
formyl-CoA transferase (EC:2.8.3.16)
Formyl-CoA transferase {ECO:0000313|EMBL:AEA26301.1}; EC=2.8.3.16 {ECO:0000313|EMBL:AEA26301.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.
Formyl-CoA transferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT83_PSEUX
cn_combo_scaffold_3996_6
Lottia gigantea, Lottia, Gastropoda, Mollusca, Metazoa

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comp(6780..7544)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Lottia gigantea RepID=V4ASQ8_LOTGI
Uncharacterized protein {ECO:0000313|EMBL:ESO97875.1}; TaxID=225164 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Patellogastropoda; Lottioidea; Lottiidae; Lottia.;" source="Lotti
Conserved protein of unknown function, PE-PGRS family protein (PE-PGRS 53-fragment)
cn_combo_scaffold_3996_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7949..9163
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT81_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26299.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
cn_combo_scaffold_3996_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9171..9764)
DNA (594bp) protein (198aa)
Regulatory protein TetR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT80_PSEUX
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:AEA26298.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_3996_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9805..10728)
DNA (924bp) protein (308aa)
Luciferase-like, subgroup n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT79_PSEUX
luciferase-like protein
Luciferase-like, subgroup {ECO:0000313|EMBL:AEA26297.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (
cn_combo_scaffold_3996_10
unknown

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10944..11297
DNA (354bp) protein (118aa)

This feature has no annotations

cn_combo_scaffold_3996_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11814..12467
DNA (654bp) protein (218aa)
Nitroreductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT68_PSEUX
nitroreductase rbh
Nitroreductase {ECO:0000313|EMBL:AEA26286.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC
cn_combo_scaffold_3996_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12801..13019
DNA (219bp) protein (73aa)
L-lactate transport n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT67_PSEUX
L-lactate transport
L-lactate transport {ECO:0000313|EMBL:AEA26285.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
cn_combo_scaffold_3996_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13203..14189)
DNA (987bp) protein (329aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:AEA27196.1}; EC=5.1.3.2 {ECO:0000313|EMBL:AEA27196.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.
UDP-glucose 4-epimerase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQ00_PSEUX
cn_combo_scaffold_3996_14
Rhodococcus sp. Chr-9, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14352..15650
DNA (1299bp) protein (433aa)
UPI0003D6AF81 related cluster n=1 Tax=unknown RepID=UPI0003D6AF81
Stress protein {ECO:0000313|EMBL:KHJ73375.1}; TaxID=713612 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. Chr-9.;"
stress protein rbh
cn_combo_scaffold_3996_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15783..16898
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT65_PSEUX
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA26283.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_3996_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16947..18980)
DNA (2034bp) protein (678aa)
ATPase AAA-2 domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT61_PSEUX
ATPase rbh
ATPase AAA-2 domain protein {ECO:0000313|EMBL:AEA26279.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans
cn_combo_scaffold_3996_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19070..19408
DNA (339bp) protein (113aa)
ArsR family transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDC75
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:AEA28078.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
cn_combo_scaffold_3996_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19415..20857
DNA (1443bp) protein (481aa)
Extracellular ligand-binding receptor n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D217_PSEUX
ABC transporter substrate-binding protein
Extracellular ligand-binding receptor {ECO:0000313|EMBL:AEA28077.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dio
cn_combo_scaffold_3996_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20918..21736
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT60_PSEUX
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA26278.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_3996_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21744..22094)
DNA (351bp) protein (117aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CT59_PSEUX
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AEA26277.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseu
Displaying 20 items

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