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cn_combo_scaffold_5050

Alias: PSE87_82

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_5050_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2..133
DNA (132bp) protein (44aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTT9_PSEUX
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEA22898.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
cn_combo_scaffold_5050_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

430..1398
DNA (969bp) protein (323aa)
translation initiation factor, aIF-2BI family (EC:5.3.1.23)
Translation initiation factor, aIF-2BI family {ECO:0000313|EMBL:AEA22900.1}; EC=5.3.1.23 {ECO:0000313|EMBL:AEA22900.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocard
Translation initiation factor, aIF-2BI family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTU1_PSEUX
cn_combo_scaffold_5050_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1395..2606
DNA (1212bp) protein (404aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTU2_PSEUX
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEA22901.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
cn_combo_scaffold_5050_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2655..3017
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTU3_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22902.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_5050_5
Isoptericola variabilis, Isoptericola, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3024..3413)
DNA (390bp) protein (130aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
twitching motility protein PilT n=1 Tax=Glaciibacter superstes RepID=UPI0003B5B405
PilT protein domain-containing protein
cn_combo_scaffold_5050_6
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3410..3706)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Saccharomonospora saliphila RepID=UPI000368BE3E
prevent-host-death protein, antitoxin of TAS system
Prevent-host-death protein, antitoxin of TAS system {ECO:0000313|EMBL:CCG01139.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Bla
cn_combo_scaffold_5050_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3808..4443)
DNA (636bp) protein (212aa)
Beta-lactamase domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTU4_PSEUX
beta-lactamase domain-containing protein rbh
Beta-lactamase domain protein {ECO:0000313|EMBL:AEA22903.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
cn_combo_scaffold_5050_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4443..5528)
DNA (1086bp) protein (362aa)
mycothiol-dependent formaldehyde dehydrogenase (EC:1.1.1.306) rbh
Mycothiol-dependent formaldehyde dehydrogenase {ECO:0000313|EMBL:AEA22904.1}; EC=1.1.1.306 {ECO:0000313|EMBL:AEA22904.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonoca
Mycothiol-dependent formaldehyde dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTU5_PSEUX
cn_combo_scaffold_5050_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5626..6381
DNA (756bp) protein (252aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTU6_PSEUX
enoyl-CoA hydratase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:AEA22905.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
cn_combo_scaffold_5050_10
unknown

Not on your lists

6415..6534
DNA (120bp) protein (40aa)

This feature has no annotations

cn_combo_scaffold_5050_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6592..7752
DNA (1161bp) protein (387aa)
Fumarylacetoacetase (EC:3.7.1.2)
Fumarylacetoacetase {ECO:0000313|EMBL:AEA22906.1}; EC=3.7.1.2 {ECO:0000313|EMBL:AEA22906.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" s
Fumarylacetoacetase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTU7_PSEUX
cn_combo_scaffold_5050_12
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7829..8026)
DNA (198bp) protein (66aa)
MerR family transcriptional regulator n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2X983_9PSEU
MerR family transcriptional regulator
MerR family transcriptional regulator {ECO:0000313|EMBL:AJK52196.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis luri
cn_combo_scaffold_5050_13
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8081..8230)
DNA (150bp) protein (50aa)
MerR family transcriptional regulator n=1 Tax=Amycolatopsis methanolica RepID=UPI0003725293
MerR family transcriptional regulator
MerR family transcriptional regulator {ECO:0000313|EMBL:EOD69268.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vanc
cn_combo_scaffold_5050_14
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8292..8531)
DNA (240bp) protein (80aa)
Short-chain dehydrogenase/reductase SDR n=2 Tax=Saccharopolyspora erythraea RepID=A4FGI2_SACEN
oxidoreductase
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CAM03157.1}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolys
cn_combo_scaffold_5050_15
Streptomyces sp. 150FB, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8631..9176)
DNA (546bp) protein (182aa)
oxidoreductase n=1 Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI0003750B83
Oxidoreductase {ECO:0000313|EMBL:KIF73620.1}; TaxID=1576605 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 150FB.;"
oxidoreductase
cn_combo_scaffold_5050_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9222..9641)
DNA (420bp) protein (140aa)
Thioesterase superfamily protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTU8_PSEUX
thioesterase
Thioesterase superfamily protein {ECO:0000313|EMBL:AEA22907.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxaniv
cn_combo_scaffold_5050_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9634..10032)
DNA (399bp) protein (133aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTU9_PSEUX
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:AEA22908.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia d
cn_combo_scaffold_5050_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10368..11078)
DNA (711bp) protein (237aa)
Transcriptional regulator, MerR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTV1_PSEUX
MerR family transcriptional regulator rbh
Transcriptional regulator, MerR family {ECO:0000313|EMBL:AEA22910.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
cn_combo_scaffold_5050_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11170..11661
DNA (492bp) protein (164aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AEA22911.1}; EC=2.3.1.16 {ECO:0000313|EMBL:AEA22911.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonoc
Acetyl-CoA acetyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CTV2_PSEUX
Displaying 19 items

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