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cn_combo_scaffold_5211

Alias: PSE87_87

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_5211_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2..1108
DNA (1107bp) protein (369aa)
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
Valine--tRNA ligase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVM6_PSEUX
cn_combo_scaffold_5211_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1388..2242
DNA (855bp) protein (285aa)
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
Valine--tRNA ligase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVM6_PSEUX
Suspect SCG annotation. See neighboring gene [cn_combo_scaffold_5211_1].
cn_combo_scaffold_5211_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2239..3756
DNA (1518bp) protein (506aa)
bifunctional folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.17)
FolC bifunctional protein {ECO:0000313|EMBL:AEA24202.1}; EC=6.3.2.17 {ECO:0000313|EMBL:AEA24202.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocard
FolC bifunctional protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVM7_PSEUX
cn_combo_scaffold_5211_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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3753..4145
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVM8_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24203.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_5211_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4150..5088)
DNA (939bp) protein (313aa)
Lysyl oxidase-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVM9_PSEUX
lysyl oxidase-like protein
Lysyl oxidase-like protein {ECO:0000313|EMBL:AEA24204.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonoca
cn_combo_scaffold_5211_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5215..5625
DNA (411bp) protein (137aa)
nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.
Nucleoside diphosphate kinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVN0_PSEUX
cn_combo_scaffold_5211_7
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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5607..6137
DNA (531bp) protein (177aa)
GCN5-related N-acetyltransferase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEE37
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:CAM00724.1}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain
cn_combo_scaffold_5211_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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6792..7736
DNA (945bp) protein (315aa)
polyamine-transporting ATPase (EC:3.6.3.31)
Polyamine-transporting ATPase {ECO:0000313|EMBL:AEA24206.1}; EC=3.6.3.31 {ECO:0000313|EMBL:AEA24206.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudono
Polyamine-transporting ATPase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVN1_PSEUX
cn_combo_scaffold_5211_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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7736..8569
DNA (834bp) protein (278aa)
ABC-2 type transporter n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVN2_PSEUX
ABC transporter rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivoran
cn_combo_scaffold_5211_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8566..9390
DNA (825bp) protein (275aa)
ABC-2 type transporter n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVN3_PSEUX
ABC transporter rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivoran
cn_combo_scaffold_5211_11
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9495..10202
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Ruegeria conchae RepID=UPI000237871D
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:EIF32959.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Bu
hypothetical protein
cn_combo_scaffold_5211_12
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(10345..10995)
DNA (651bp) protein (217aa)
TetR family transcriptional regulator n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IDW0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KBZ61027.1}; TaxID=1324261 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source
TetR family transcriptional regulator
cn_combo_scaffold_5211_13
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(11068..11358)
DNA (291bp) protein (97aa)
Short-chain dehydrogenase/reductase sdr n=1 Tax=Saccharomonospora azurea SZMC 14600 RepID=H0KAA9_9PSEU
Short-chain dehydrogenase/reductase sdr {ECO:0000313|EMBL:EHK82464.1}; TaxID=1114959 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomono
short-chain dehydrogenase/reductase SDR
cn_combo_scaffold_5211_14
unknown

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comp(11584..11694)
DNA (111bp) protein (37aa)

This feature has no annotations

cn_combo_scaffold_5211_15
Rhodococcus sp. AW25M09, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(12002..12814)
DNA (813bp) protein (271aa)
fadB; long-chain-fatty-acid-CoA ligase (EC:6.2.1.3)
Linear gramicidin synthase subunit C n=1 Tax=Rhodococcus sp. AW25M09 RepID=L8DJQ6_9NOCA
Linear gramicidin synthase subunit C {ECO:0000313|EMBL:CCQ14881.1}; TaxID=1268303 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AW25M09.;"
Displaying 15 items

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