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cn_combo_scaffold_5328

Alias: PSE87_96

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_5328_1
Mycobacterium canettii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..208
DNA (207bp) protein (69aa)
Transposase IS116/IS110/IS902 family protein n=2 Tax=Mycobacterium canettii RepID=G0TNW5_MYCCP
transposase IS116/IS110/IS902 family protein
Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:CCC42720.1}; TaxID=1048245 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculo
cn_combo_scaffold_5328_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(287..1036)
DNA (750bp) protein (250aa)
ABC-2 type transporter n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKC6_PSEUX
ABC transporter rbh
ABC-2 type transporter {ECO:0000313|EMBL:AEA22473.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (str
cn_combo_scaffold_5328_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1033..1935)
DNA (903bp) protein (301aa)
sulfate-transporting ATPase (EC:3.6.3.25) rbh
Sulfate-transporting ATPase {ECO:0000313|EMBL:AEA22474.1}; EC=3.6.3.25 {ECO:0000313|EMBL:AEA22474.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonoca
Sulfate-transporting ATPase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKC7_PSEUX
cn_combo_scaffold_5328_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1932..2279)
DNA (348bp) protein (116aa)
MarR family transcriptional regulator n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKC8_PSEUX
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:AEA22475.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dio
cn_combo_scaffold_5328_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2276..2923)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKC9_PSEUX
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA22476.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_5328_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3651..4067
DNA (417bp) protein (139aa)
GtrA family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKD3_PSEUX
GtrA family protein
GtrA family protein {ECO:0000313|EMBL:AEA22480.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
cn_combo_scaffold_5328_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4071..4985)
DNA (915bp) protein (305aa)
Glycosyl transferase family 2 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKD4_PSEUX
family 2 glycosyl transferase rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEA22481.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
cn_combo_scaffold_5328_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4982..5752)
DNA (771bp) protein (257aa)
teichoic-acid-transporting AtPase (EC:3.6.3.40) rbh
Teichoic-acid-transporting ATPase {ECO:0000313|EMBL:AEA22482.1}; EC=3.6.3.40 {ECO:0000313|EMBL:AEA22482.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseu
Teichoic-acid-transporting ATPase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKD5_PSEUX
cn_combo_scaffold_5328_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5757..6632)
DNA (876bp) protein (292aa)
ABC-2 type transporter n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKD6_PSEUX
ABC transporter rbh
ABC-2 type transporter {ECO:0000313|EMBL:AEA22483.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (str
cn_combo_scaffold_5328_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6743..7345)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKD7_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22484.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_5328_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7398..8414)
DNA (1017bp) protein (339aa)
NAD(P)H quinone oxidoreductase (EC:1.6.5.5)
NAD(P)H quinone oxidoreductase, PIG3 family {ECO:0000313|EMBL:AEA22485.1}; EC=1.6.5.5 {ECO:0000313|EMBL:AEA22485.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiac
NAD(P)H quinone oxidoreductase, PIG3 family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKD8_PSEUX
cn_combo_scaffold_5328_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8424..9098
DNA (675bp) protein (225aa)
GCN5-related N-acetyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKD9_PSEUX
GCN5-like N-acetyltransferase rbh
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEA22486.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxaniv
cn_combo_scaffold_5328_13
unknown

Not on your lists

comp(9074..9340)
DNA (267bp) protein (89aa)

This feature has no annotations

cn_combo_scaffold_5328_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9482..10429)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKE0_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22487.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_5328_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10529..11017
DNA (489bp) protein (163aa)
Regulatory protein MarR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM01_PSEUX
regulatory protein MarR
Regulatory protein MarR {ECO:0000313|EMBL:AEA22488.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_5328_16
Gordonia polyisoprenivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11641..13707
DNA (2067bp) protein (689aa)
Uncharacterized protein n=1 Tax=Gordonia polyisoprenivorans (strain DSM 44266 / VH2) RepID=H6N5C8_GORPV
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFA76173.1}; TaxID=1112204 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia polyisoprenivorans (strain DSM 442
cn_combo_scaffold_5328_17
Streptomyces sp. HPH0547, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13704..14936)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. HPH0547 RepID=S3AQC9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD91408.1}; TaxID=1203592 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HPH0547.;"
integrase
cn_combo_scaffold_5328_18
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14936..15148)
DNA (213bp) protein (71aa)
transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEF56
excisionase family DNA binding domain-containing protein
DNA binding domain protein, excisionase family {ECO:0000313|EMBL:ACV76894.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multip
cn_combo_scaffold_5328_19
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15145..15336)
DNA (192bp) protein (64aa)
replication initiation protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFED9C
Replication initiation protein {ECO:0000313|EMBL:ABV97459.1}; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strai
Displaying 19 items

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