ggKbase home page

cn_combo_scaffold_5414

Alias: PSE87_100

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_5414_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..1141
DNA (1140bp) protein (380aa)
AAA ATPase central domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV81_PSEUX
ATPase AAA
AAA ATPase central domain protein {ECO:0000313|EMBL:AEA28627.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxani
cn_combo_scaffold_5414_2
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1209..2690)
DNA (1482bp) protein (494aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI000362B230
Putative transporter {ECO:0000313|EMBL:GAD35369.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
permease of the major facilitator superfamily
cn_combo_scaffold_5414_3
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2769..3413
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00037F8C03
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:GAD35370.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;
cn_combo_scaffold_5414_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3410..4066
DNA (657bp) protein (219aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV80_PSEUX
tRNA/rRNA methyltransferase SpoU
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:AEA28626.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxan
cn_combo_scaffold_5414_5
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4103..5785
DNA (1683bp) protein (561aa)
Multidrug ABC transporter ATPase/permease n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4SUP1_AMYOR
multidrug ABC transporter ATPase/permease rbh
Multidrug ABC transporter ATPase/permease {ECO:0000313|EMBL:AGM06265.1}; TaxID=1156913 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis
cn_combo_scaffold_5414_6
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5782..7536
DNA (1755bp) protein (585aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003746DDA
multidrug ABC transporter permease rbh
Multidrug ABC transporter permease {ECO:0000313|EMBL:AJK52826.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida
cn_combo_scaffold_5414_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7619..8548
DNA (930bp) protein (310aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV79_PSEUX
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein {ECO:0000313|EMBL:AEA28625.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" so
cn_combo_scaffold_5414_8
unknown

Not on your lists

8666..9112
DNA (447bp) protein (149aa)

This feature has no annotations

cn_combo_scaffold_5414_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9109..10158
DNA (1050bp) protein (350aa)
Glycoside hydrolase family 76 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV71_PSEUX
glycosyl hydrolase protein
Glycoside hydrolase family 76 {ECO:0000313|EMBL:AEA28617.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivora
cn_combo_scaffold_5414_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10165..10884)
DNA (720bp) protein (240aa)
SNARE associated Golgi protein-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV70_PSEUX
hypothetical protein
SNARE associated Golgi protein-like protein {ECO:0000313|EMBL:AEA28616.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" s
cn_combo_scaffold_5414_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10928..11596)
DNA (669bp) protein (223aa)
SNARE associated Golgi protein-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV69_PSEUX
hypothetical protein rbh
SNARE associated Golgi protein-like protein {ECO:0000313|EMBL:AEA28615.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocard
Displaying 11 items

View Taxonomy