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cn_combo_scaffold_6069

Alias: PSE87_122

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_6069_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..265
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNT4_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22546.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_6069_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

462..938
DNA (477bp) protein (159aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUJ9_PSEUX
cupin rbh
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:AEA25389.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia d
cn_combo_scaffold_6069_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(935..2164)
DNA (1230bp) protein (410aa)
FAD dependent oxidoreductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUK0_PSEUX
FAD dependent oxidoreductase rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:AEA25390.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivoran
cn_combo_scaffold_6069_4
Gordonia malaquae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2203..2796)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003722934
Uncharacterized protein {ECO:0000313|EMBL:GAC78071.1}; TaxID=1223542 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia malaquae NBRC 108250.;"
hypothetical protein
cn_combo_scaffold_6069_5
Rhodococcus pyridinivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2869..3684)
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Rhodococcus rhodochrous RepID=UPI000310E327
alpha/beta hydrolase
Alpha/beta hydrolase {ECO:0000313|EMBL:AHD19790.1}; TaxID=1435356 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus pyridinivorans SB3094.;"
cn_combo_scaffold_6069_6
Nocardia vulneris, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3681..4367)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0EUA5_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:KIA64249.1}; TaxID=1141657 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia vulneris.;"
hypothetical protein
cn_combo_scaffold_6069_7
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4753..5952
DNA (1200bp) protein (400aa)
Monooxygenase FAD-binding protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLI9_PSEUX
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KDN18795.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;
monooxygenase FAD-binding protein
cn_combo_scaffold_6069_8
Gordonia sp. KTR9, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6095..7321)
DNA (1227bp) protein (409aa)
Acetyl-CoA acetyltransferase n=1 Tax=Gordonia sp. KTR9 RepID=J9SRI7_9ACTO
Acetyl-CoA acetyltransferase
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AFR50963.1}; TaxID=337191 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sp. KTR9.;"
cn_combo_scaffold_6069_9
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7501..8034
DNA (534bp) protein (178aa)
transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE3AA
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AIY16669.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (
cn_combo_scaffold_6069_10
unknown

Not on your lists

8054..8296
DNA (243bp) protein (81aa)

This feature has no annotations

cn_combo_scaffold_6069_11
Gordonia soli, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8689..9345)
DNA (657bp) protein (219aa)
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:3.5.1.4)
Putative GntR family transcriptional regulator/amidase n=1 Tax=Gordonia soli NBRC 108243 RepID=M0QPV8_9ACTO
Putative GntR family transcriptional regulator/amidase {ECO:0000313|EMBL:GAC70404.1}; TaxID=1223545 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sol
cn_combo_scaffold_6069_12
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9364..10431)
DNA (1068bp) protein (356aa)
O-methyltransferase family 2 n=1 Tax=Streptomyces violaceusniger Tu 4113 PF79_STRVO">RepID=G2PF79_STRVO
O-methyltransferase rbh
O-methyltransferase family 2 {ECO:0000313|EMBL:AEM84222.1}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger Tu
cn_combo_scaffold_6069_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10479..11216
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQC8_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28401.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_6069_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11288..12211)
DNA (924bp) protein (308aa)
Regulatory protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CK10_PSEUX
regulatory protein
Regulatory protein {ECO:0000313|EMBL:AEA28116.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
cn_combo_scaffold_6069_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12413..13378)
DNA (966bp) protein (322aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35) rbh
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:AEA27812.1}; EC=1.1.1.35 {ECO:0000313|EMBL:AEA27812.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudo
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0L3_PSEUX
cn_combo_scaffold_6069_16
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13578..14483)
DNA (906bp) protein (302aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A2K4_STAND
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AJE48768.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Cele
cn_combo_scaffold_6069_17
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14506..14673)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CUZ7_CLAM3
Uncharacterized protein {ECO:0000313|EMBL:KDP92016.1}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG 26808
hypothetical protein
cn_combo_scaffold_6069_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14813..15301)
DNA (489bp) protein (163aa)
Putative phosphatase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CW46_PSEUX
phosphatase
Putative phosphatase {ECO:0000313|EMBL:AEA26460.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strai
cn_combo_scaffold_6069_19
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15425..15964
DNA (540bp) protein (180aa)
Uncharacterized protein {ECO:0000313|EMBL:KIA83364.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
cn_combo_scaffold_6069_20
unknown

Not on your lists

15961..16143
DNA (183bp) protein (61aa)

This feature has no annotations

cn_combo_scaffold_6069_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16144..16491
DNA (348bp) protein (116aa)
DSBA oxidoreductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXE7_PSEUX
DSBA oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:AEA26521.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia di
cn_combo_scaffold_6069_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16955..17224
DNA (270bp) protein (90aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXE5_PSEUX
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:AEA26519.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocar
Displaying 22 items

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