ggKbase home page

cn_combo_scaffold_6061

Alias: PSE87_123

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_6061_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..985
DNA (984bp) protein (328aa)
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|R
Glucose-6-phosphate isomerase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWZ1_PSEUX
cn_combo_scaffold_6061_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

985..1257
DNA (273bp) protein (91aa)
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|R
Glucose-6-phosphate isomerase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWZ1_PSEUX
cn_combo_scaffold_6061_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1355..2080
DNA (726bp) protein (242aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWZ0_PSEUX
phosphoesterase PA-phosphatase-like protein
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:AEA24245.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;
cn_combo_scaffold_6061_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2131..2907)
DNA (777bp) protein (259aa)
DNA-formamidopyrimidine glycosylase (EC:3.2.2.23) rbh
DNA-formamidopyrimidine glycosylase {ECO:0000313|EMBL:AEA24244.1}; EC=3.2.2.23 {ECO:0000313|EMBL:AEA24244.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Ps
DNA-formamidopyrimidine glycosylase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWY9_PSEUX
cn_combo_scaffold_6061_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2960..3799
DNA (840bp) protein (280aa)
ABC transporter related protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWY8_PSEUX
ABC transporter rbh
ABC transporter related protein {ECO:0000313|EMBL:AEA24243.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivo
cn_combo_scaffold_6061_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3903..5687
DNA (1785bp) protein (595aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWY7_PSEUX
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:AEA24242.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonoca
alkyl hydroperoxide reductase rbh
cn_combo_scaffold_6061_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5692..6444)
DNA (753bp) protein (251aa)
Alpha/beta hydrolase fold protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWY6_PSEUX
alpha/beta hydrolase
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AEA24241.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxani
cn_combo_scaffold_6061_8
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7076..12028)
DNA (4953bp) protein (1651aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036B1297
comE; DNA internalization-related competence protein ComEC/Rec2
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:AIJ21881.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source
cn_combo_scaffold_6061_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12025..12798)
DNA (774bp) protein (258aa)
Competence protein ComEA helix-hairpin-helix repeat protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWY2_PSEUX
competence protein ComEA rbh
Competence protein ComEA helix-hairpin-helix repeat protein {ECO:0000313|EMBL:AEA24237.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" sour
cn_combo_scaffold_6061_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13144..14070)
DNA (927bp) protein (309aa)
DegV family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWY1_PSEUX
degV family protein
DegV family protein {ECO:0000313|EMBL:AEA24236.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
cn_combo_scaffold_6061_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14072..14788)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWY0_PSEUX
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA24235.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_6061_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14803..15429)
DNA (627bp) protein (209aa)
Phosphoglycerate mutase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWX9_PSEUX
phosphoglycerate mutase rbh
Phosphoglycerate mutase {ECO:0000313|EMBL:AEA24234.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_6061_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15426..15833)
DNA (408bp) protein (136aa)
Ribosomal silencing factor RsfS n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWX8_PSEUX
iojap family protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
cn_combo_scaffold_6061_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15909..16520)
DNA (612bp) protein (204aa)
nicotinate-nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244};
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWX7_PSEUX
cn_combo_scaffold_6061_15
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16517..17128)
DNA (612bp) protein (204aa)
Putative alkylated DNA repair protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWX6_PSEUX
alkylated DNA repair protein
Putative alkylated DNA repair protein {ECO:0000313|EMBL:AEA24231.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dio
cn_combo_scaffold_6061_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17170..17724)
DNA (555bp) protein (185aa)
Regulatory protein TetR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWX5_PSEUX
TetR family transcriptional regulator rbh
Regulatory protein TetR {ECO:0000313|EMBL:AEA24230.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_6061_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17839..18201)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWX4_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24229.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
cn_combo_scaffold_6061_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18392..19063
DNA (672bp) protein (224aa)
Hemerythrin HHE cation binding domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWX3_PSEUX
hemerythrin HHE cation binding domain-containing protein rbh
Hemerythrin HHE cation binding domain protein {ECO:0000313|EMBL:AEA24228.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonoca
cn_combo_scaffold_6061_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19064..22348)
DNA (3285bp) protein (1095aa)
Transcriptional regulator, putative ATPase, winged helix family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWX2_PSEUX
Transcriptional regulator, putative ATPase, winged helix family {ECO:0000313|EMBL:AEA24227.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;"
winged helix family transcriptional regulator
cn_combo_scaffold_6061_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22378..22797)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWX1_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA24226.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_6061_21
Streptomyces iranensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22823..23719)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Nocardiopsis ganjiahuensis RepID=UPI00034765B6
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:CDR06298.1}; TaxID=576784 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces iran
toxin-antitoxin system toxin subunit
cn_combo_scaffold_6061_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23712..24032)
DNA (321bp) protein (107aa)
Regulatory protein ArsR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWW9_PSEUX
regulatory protein ArsR
Regulatory protein ArsR {ECO:0000313|EMBL:AEA24224.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
cn_combo_scaffold_6061_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24050..25486)
DNA (1437bp) protein (479aa)
VWA containing CoxE family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWW8_PSEUX
von Willebrand factor A
VWA containing CoxE family protein {ECO:0000313|EMBL:AEA24223.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxan
cn_combo_scaffold_6061_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25500..26354)
DNA (855bp) protein (285aa)
ATPase associated with various cellular activities AAA_5 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWW7_PSEUX
ATPase
ATPase associated with various cellular activities AAA_5 {ECO:0000313|EMBL:AEA24222.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source=
cn_combo_scaffold_6061_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26513..28690
DNA (2178bp) protein (726aa)
ATP-dependent DNA helicase, RecQ family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWW6_PSEUX
ATP-dependent DNA helicase, RecQ family {ECO:0000313|EMBL:AEA24221.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia d
ATP-dependent DNA helicase RecQ
cn_combo_scaffold_6061_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28698..29909)
DNA (1212bp) protein (404aa)
protein-L-isoaspartate(D-aspartate) O-methyltransferase (EC:2.1.1.77) rbh
Protein-L-isoaspartate(D-aspartate) O-methyltransferase {ECO:0000313|EMBL:AEA24220.1}; EC=2.1.1.77 {ECO:0000313|EMBL:AEA24220.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Ps
Protein-L-isoaspartate(D-aspartate) O-methyltransferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWW5_PSEUX
Displaying 26 items

View Taxonomy