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cn_combo_scaffold_6648

Alias: PSE87_137

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_6648_1
Streptomyces mutabilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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134..826
DNA (693bp) protein (231aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=67332 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Strepto
rpe; ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=3 Tax=Saccharopolyspora erythraea RepID=A4FBK1_SACEN
cn_combo_scaffold_6648_2
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(827..2161)
DNA (1335bp) protein (445aa)
LytTR family transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDB30
LytTr DNA-binding region rbh
LytTr DNA-binding region {ECO:0000313|EMBL:AIJ24613.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;
cn_combo_scaffold_6648_3
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2485..2769)
DNA (285bp) protein (95aa)
Putative transposase n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0ESZ5_9NOCA
putative transposase
Putative transposase {ECO:0000313|EMBL:AFU02918.1}; TaxID=1133849 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis ATCC 700358.;"
cn_combo_scaffold_6648_4
unknown

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2789..3424
DNA (636bp) protein (212aa)

This feature has no annotations

cn_combo_scaffold_6648_5
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3407..3772)
DNA (366bp) protein (122aa)
Integrase catalytic region n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J779_FRASU
integrase catalytic subunit
Integrase catalytic region {ECO:0000313|EMBL:ADP84443.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
cn_combo_scaffold_6648_6
unknown

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3816..4106
DNA (291bp) protein (97aa)

This feature has no annotations

cn_combo_scaffold_6648_7
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4191..4580)
DNA (390bp) protein (130aa)
Integrase catalytic region n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J779_FRASU
integrase catalytic subunit
Integrase catalytic region {ECO:0000313|EMBL:ADP84443.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
cn_combo_scaffold_6648_8
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(4681..5757)
DNA (1077bp) protein (359aa)
Putative transposase n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H527_ACTM4
putative transposase
Putative transposase {ECO:0000313|EMBL:BAL90606.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain AT
cn_combo_scaffold_6648_9
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5924..7306)
DNA (1383bp) protein (461aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01981}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_01981};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01981};; EC=2.7.1.11 {ECO:
diphosphate--fructose-6-phosphate 1-phosphotransferase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEEBC
pfk; phosphofructokinase rbh
cn_combo_scaffold_6648_10
Streptomyces mutabilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7334..8275)
DNA (942bp) protein (314aa)
fructose 1,6-bisphosphatase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEEBD
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; TaxID=67332 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mutabilis.;"
glpX; fructose 1,6-bisphosphatase II
cn_combo_scaffold_6648_11
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8323..8910)
DNA (588bp) protein (196aa)
3-hexulose-6-phosphate isomerase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE9B6
hpi; 6-phospho-3-hexuloisomerase
6-phospho-3-hexuloisomerase {ECO:0000313|EMBL:AIJ24609.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 23
cn_combo_scaffold_6648_12
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(8942..11047)
DNA (2106bp) protein (702aa)
transketolase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE9B7
Transketolase {ECO:0000313|EMBL:EHR50633.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
tkt; transketolase
cn_combo_scaffold_6648_13
Streptomyces mutabilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11086..11190)
DNA (105bp) protein (35aa)
3-hexulose-6-phosphate synthase {ECO:0000313|EMBL:KFG71525.1}; TaxID=67332 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mutabilis.;"
Displaying 13 items

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