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cn_combo_scaffold_2201

Alias: VAR87_62b

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2201_1
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..78)
DNA (78bp) protein (26aa)
Uncharacterized protein {ECO:0000313|EMBL:ACL72954.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkali
cn_combo_scaffold_2201_2
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(879..1340)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12J) RepID=B2UA47_RALPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD27741.1}; TaxID=402626 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (
cn_combo_scaffold_2201_3
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1557..1766)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12J) RepID=B2UA46_RALPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD27740.1}; TaxID=402626 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (
cn_combo_scaffold_2201_4
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1829..3868)
DNA (2040bp) protein (680aa)
ParB domain protein nuclease n=1 Tax=Ralstonia pickettii (strain 12J) RepID=B2UA45_RALPJ
ParB domain protein nuclease {ECO:0000313|EMBL:ACD27739.1}; TaxID=402626 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia picket
ParB domain-containing protein nuclease
cn_combo_scaffold_2201_5
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3934..4758)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12J) RepID=B2UA44_RALPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD27738.1}; TaxID=402626 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (
cn_combo_scaffold_2201_6
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5694..5993
DNA (300bp) protein (100aa)
Uncharacterized protein n=5 Tax=Proteobacteria RepID=B2UA43_RALPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF09908.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidu
cn_combo_scaffold_2201_7
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6136..6414)
DNA (279bp) protein (93aa)
Uncharacterized protein n=4 Tax=Proteobacteria RepID=A9BTW1_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX35375.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (stra
cn_combo_scaffold_2201_8
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6478..6828)
DNA (351bp) protein (117aa)
Uncharacterized protein n=5 Tax=Proteobacteria RepID=B2UA41_RALPJ
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EED68056.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni
cn_combo_scaffold_2201_9
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7205..8275)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=5 Tax=Proteobacteria RepID=A9BTW3_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD27734.1}; TaxID=402626 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (
cn_combo_scaffold_2201_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8321..10576)
DNA (2256bp) protein (752aa)
UBA/THIF-type NAD/FAD binding protein n=6 Tax=Proteobacteria RepID=A9BTW4_DELAS
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:ABX35378.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia aci
UBA/THIF-type NAD/FAD binding protein
cn_combo_scaffold_2201_11
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10573..11766)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12J) RepID=B2UA38_RALPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD27732.1}; TaxID=402626 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (
cn_combo_scaffold_2201_12
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11856..12758
DNA (903bp) protein (301aa)
Uncharacterized protein n=2 Tax=Burkholderiales RepID=A9BTW6_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD27731.1}; TaxID=402626 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (
cn_combo_scaffold_2201_13
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12765..13553
DNA (789bp) protein (263aa)
Uncharacterized protein n=6 Tax=Proteobacteria RepID=A9BTW7_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF09915.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidu
cn_combo_scaffold_2201_14
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13599..14735)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12J) RepID=B2UA35_RALPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD27729.1}; Flags: Precursor;; TaxID=402626 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ra
cn_combo_scaffold_2201_15
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14732..15931)
DNA (1200bp) protein (400aa)
Integrase family protein n=4 Tax=Proteobacteria RepID=B2UA34_RALPJ
int; tyrosine-based site-specific recombinase
Tyrosine-based site-specific recombinase {ECO:0000313|EMBL:ABF09917.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ra
cn_combo_scaffold_2201_16
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16163..16504)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036ED0AD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIO37029.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
cn_combo_scaffold_2201_17
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16716..16946
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000366190B
Variovorax paradoxus strain MEDvA23 contig_70, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25197.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
hypothetical protein
cn_combo_scaffold_2201_18
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17209..17907
DNA (699bp) protein (233aa)
Crp/Fnr family transcription regulator n=1 Tax=Variovorax paradoxus RepID=UPI000371C654
transcriptional regulator, Crp/Fnr family
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:AGU53064.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var
cn_combo_scaffold_2201_19
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18029..18286
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037D58F8
Uncharacterized protein {ECO:0000313|EMBL:EJL75578.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.
cn_combo_scaffold_2201_20
unknown

Not on your lists

comp(18461..19039)
DNA (579bp) protein (193aa)

This feature has no annotations

cn_combo_scaffold_2201_21
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19445..20866
DNA (1422bp) protein (474aa)
EAL domain-containing protein n=1 Tax=Variovorax sp. CF313 RepID=J2KHJ1_9BURK
EAL domain-containing protein {ECO:0000313|EMBL:EJL72558.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" sour
hypothetical protein
cn_combo_scaffold_2201_22
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20863..21069
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037AAB81
cn_combo_scaffold_2201_23
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21066..21710
DNA (645bp) protein (215aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D1Y9_VARPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS22909.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var
cn_combo_scaffold_2201_24
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21727..23136
DNA (1410bp) protein (470aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D1Z0_VARPS
Putative protein involved in formation of curli polymers-like protein
Uncharacterized protein {ECO:0000313|EMBL:ACS22910.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var
cn_combo_scaffold_2201_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23242..25020
DNA (1779bp) protein (593aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003689392
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS22911.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var
Displaying 25 items

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