Alias: VAR87_1
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
cn_combo_scaffold_29_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(2..85)
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NAD(P)(+) transhydrogenase (AB-specific) {ECO:0000313|EMBL:ACS22611.1}; EC=1.6.1.2 {ECO:0000313|EMBL:ACS22611.1};; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
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cn_combo_scaffold_29_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
529..1245
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Two component transcriptional regulator, winged helix family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V3E8_VARPE
Variovorax paradoxus strain MEDvA23 contig_67, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25629.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
winged helix family two component transcriptional regulator
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cn_combo_scaffold_29_3
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
1322..1747
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Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2KHX0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL79800.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va
hypothetical protein
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cn_combo_scaffold_29_4
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
1778..2269
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ADP-ribose pyrophosphatase n=1 Tax=Variovorax sp. CF313 RepID=J3CWQ0_9BURK
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:EJL79801.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF3
nudix hydrolase
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cn_combo_scaffold_29_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(2271..3380)
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tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-)
thiouridylase n=1 Tax=Variovorax paradoxus RepID=UPI0003767101
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cn_combo_scaffold_29_6
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
3525..5252
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Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Variovorax sp. CF313 RepID=J2L3I0_9BURK
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:EJL79803.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadac
AMP-dependent synthetase and ligase
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cn_combo_scaffold_29_7
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(5266..6264)
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Luciferase family oxidoreductase, group 1 n=1 Tax=Variovorax sp. CF313 RepID=J3CWA1_9BURK
Luciferase family oxidoreductase, group 1 {ECO:0000313|EMBL:EJL79804.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var
luciferase family oxidoreductase, group 1
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cn_combo_scaffold_29_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(6309..7991)
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Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V3E3_VARPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU34633.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (
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cn_combo_scaffold_29_9
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(8040..8639)
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hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000361ADC5
Strain MEJ086 contig_63, whole genome shotgun sequence {ECO:0000313|EMBL:KIP96330.1}; TaxID=47880 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
hypothetical protein
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cn_combo_scaffold_29_10
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(8653..10455)
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VanW family protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V3E2_VARPE
vanw family protein
VanW family protein {ECO:0000313|EMBL:ADU34632.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (stra
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cn_combo_scaffold_29_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(10452..11057)
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Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2KHX4_9BURK
Variovorax paradoxus strain MEDvA23 contig_67, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25623.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
hypothetical protein
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cn_combo_scaffold_29_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
11274..11933
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Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V3E0_VARPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU34630.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (
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cn_combo_scaffold_29_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(11944..12621)
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Nicotinamidase-like amidase n=1 Tax=Burkholderia sp. BT03 RepID=J2HM43_9BURK
Variovorax paradoxus strain MEDvA23 contig_67, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25622.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
isochorismatase hydrolase
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cn_combo_scaffold_29_14
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(12674..13054)
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helicase SNF2 n=1 Tax=Variovorax paradoxus RepID=UPI00036F30F5
snf2 superfamily protein
SNF2 superfamily protein {ECO:0000313|EMBL:ADU34629.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va
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cn_combo_scaffold_29_15
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
13240..13731
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Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2L3I5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL79808.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.
hypothetical protein
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cn_combo_scaffold_29_16
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(13738..14328)
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Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CWA3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL79809.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.
bioy protein
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cn_combo_scaffold_29_17
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(14369..14962)
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ABC-type cobalt transport system, permease component CbiQ n=1 Tax=Variovorax sp. CF313 RepID=J2KHX8_9BURK
ABC-type cobalt transport system, permease component CbiQ {ECO:0000313|EMBL:EJL79810.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovora
cobalt transport protein
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cn_combo_scaffold_29_18
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(14955..15674)
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ABC-type cobalt transport system, ATPase component n=1 Tax=Variovorax sp. CF313 RepID=J3CWQ5_9BURK
ABC-type cobalt transport system, ATPase component {ECO:0000313|EMBL:EJL79811.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" so
ABC transporter
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cn_combo_scaffold_29_19
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(15744..16586)
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phosphonomutase n=1 Tax=Variovorax paradoxus RepID=UPI000365F361
PEP phosphonomutase-like enzyme {ECO:0000313|EMBL:EJL79812.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp
pep phosphonomutase and related enzymes-like protein
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cn_combo_scaffold_29_20
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(16660..17955)
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membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI000363F1DF
MFS permease
Probable MFS permease {ECO:0000313|EMBL:CAP45237.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strai
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cn_combo_scaffold_29_21
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(17952..20294)
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hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035FC492
Uncharacterized protein {ECO:0000313|EMBL:EJL71352.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.
hypothetical protein
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cn_combo_scaffold_29_22
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(20291..21703)
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Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC:2.6.1.62)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00038212BF
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000313|EMBL:EJL71354.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovor
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cn_combo_scaffold_29_23
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
21807..22724
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hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000371AB51
Transcriptional regulator {ECO:0000313|EMBL:EJL71355.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF31
LysR family transcriptional regulator
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cn_combo_scaffold_29_24
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(22708..24441)
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Zinc carboxypeptidase n=1 Tax=Variovorax sp. CF313 RepID=J2L3I9_9BURK
Zinc carboxypeptidase {ECO:0000313|EMBL:EJL79813.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
peptidase, family M14
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cn_combo_scaffold_29_25
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(24455..25264)
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ABC transporter n=1 Tax=Paracoccus sp. N5 RepID=UPI00037D8E67
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ABL69357.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus
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cn_combo_scaffold_29_26
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(25254..26102)
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ABC transporter related n=1 Tax=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) RepID=B9KMD6_RHOSK
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACM02027.1}; TaxID=557760 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaer
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cn_combo_scaffold_29_27
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(26095..26991)
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cytochrome C550 n=1 Tax=Oceanicola sp. S124 RepID=UPI0002558172
D-ala-D-ala transporter subunit {ECO:0000313|EMBL:KKB85141.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM
D,D-dipeptide transport system permease protein
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cn_combo_scaffold_29_28
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(26988..28010)
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Dipeptide transport system permease protein DppB n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RAN4_9RHIZ
Peptide ABC transporter permease {ECO:0000313|EMBL:KGJ07072.1}; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus
binding-protein-dependent transport system inner membrane protein
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cn_combo_scaffold_29_29
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(28021..29595)
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Extracellular solute-binding protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C0V9_9RHIZ
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM34718.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;
ABC-type dipeptide transport system, periplasmic component
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cn_combo_scaffold_29_30
Paracoccus sp. 10990, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(29651..30121)
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Uncharacterized protein n=1 Tax=Osedax symbiont Rs1 RepID=S6GG39_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGJ20956.1}; TaxID=1525716 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 109
GAF sensor protein
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