Alias: VAR87_9
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
cn_combo_scaffold_120_1
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1..114)
|
electron transfer flavoprotein subunit beta n=1 Tax=Variovorax paradoxus RepID=UPI000372A643
electron transfer flavoprotein subunit beta
Uncharacterized protein {ECO:0000313|EMBL:EXU78427.1}; Flags: Fragment;; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Coma
|
|
cn_combo_scaffold_120_2
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(153..1154)
|
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI000364CDE0
Uncharacterized protein {ECO:0000313|EMBL:EJL70116.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va
hypothetical protein
|
|
cn_combo_scaffold_120_3
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1190..3142)
|
AMP-dependent synthetase n=1 Tax=Variovorax paradoxus RepID=UPI000368993B
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:EJL70115.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;"
AMP-dependent synthetase and ligase
|
|
cn_combo_scaffold_120_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3198..4190)
|
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI0003600FE7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU35092.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var
|
|
cn_combo_scaffold_120_5
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4231..5439)
|
Putative acyl-CoA transferase/carnitine dehydratase n=1 Tax=Variovorax sp. CF313 RepID=J2KA98_9BURK
Putative acyl-CoA transferase/carnitine dehydratase {ECO:0000313|EMBL:EJL70113.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadace
L-carnitine dehydratase/bile acid-inducible protein f
|
|
cn_combo_scaffold_120_6
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5501..6328)
|
Enoyl-CoA hydratase/carnithine racemase n=1 Tax=Variovorax sp. CF313 RepID=J2SWX6_9BURK
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:EJL70112.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Vario
enoyL-CoA hydratase/isomerase
|
|
cn_combo_scaffold_120_7
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6325..7467)
|
Acyl-CoA dehydrogenase n=1 Tax=Variovorax sp. CF313 RepID=J3CF29_9BURK
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EJL70111.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;
acyL-CoA dehydrogenase domain-containing protein
|
|
cn_combo_scaffold_120_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7480..8688)
|
acyl-CoA dehydrogenase n=1 Tax=Variovorax paradoxus RepID=UPI0003749299
acyl-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ACS17495.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovor
|
|
cn_combo_scaffold_120_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8699..9889)
|
acetyl-CoA acetyltransferase n=1 Tax=Variovorax paradoxus RepID=UPI00037B7502
acetyl-CoA acetyltransferase
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AGU48024.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax parad
|
|
cn_combo_scaffold_120_10
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9921..12056)
|
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Variovorax paradoxus RepID=UPI000369F3A5
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EJL70108.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp
fatty acid oxidation complex, subunit alpha
|
|
cn_combo_scaffold_120_11
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12196..13089
|
LysR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00036058BD
Transcriptional regulator {ECO:0000313|EMBL:EJL70107.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF31
LysR family transcriptional regulator
|
|
cn_combo_scaffold_120_12
Oxalobacteraceae bacterium JGI 0001004-K23, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13118..14467)
|
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036B81A4
|
|
cn_combo_scaffold_120_13
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14748..16235)
|
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Variovorax sp. CF313 RepID=J3CF26_9BURK
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EJL70106.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonada
diguanylate cyclase
|
|
cn_combo_scaffold_120_14
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16325..16927)
|
phospholipid-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00036D5646
Raf kinase inhibitor-like protein, YbhB/YbcL family {ECO:0000313|EMBL:EJL70105.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadace
pebp family protein
|
|
cn_combo_scaffold_120_15
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16960..17319)
|
(2Fe-2S)-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI000370BF11
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase {ECO:0000313|EMBL:EJL70104.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
rieske (2fe-2S) iron-sulfur domain
|
|
cn_combo_scaffold_120_16
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17449..18702
|
Radical SAM domain protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VAJ3_VARPE
radical SAM protein
Radical SAM domain protein {ECO:0000313|EMBL:ADU35103.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxu
|
|
cn_combo_scaffold_120_17
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18708..20231
|
uracil-DNA glycosylase n=1 Tax=Variovorax paradoxus RepID=UPI000371E69F
Variovorax paradoxus strain MEDvA23 contig_26, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ32740.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
uracil-DNA glycosylase superfamily protein
|
|
cn_combo_scaffold_120_18
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20334..21071
|
Peptidoglycan-binding domain 1 protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VAK3_VARPE
peptidoglycan-binding domain 1 protein
Peptidoglycan-binding domain 1 protein {ECO:0000313|EMBL:ADU35113.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo
|
|
cn_combo_scaffold_120_19
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21169..21378
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2SWX1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL70102.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va
hypothetical protein
|
|
cn_combo_scaffold_120_20
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21382..21924
|
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Variovorax sp. CF313 RepID=J3CF24_9BURK
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EJL70101.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="
RNA polymerase, sigma-24 subunit, ECF subfamily
|
|
cn_combo_scaffold_120_21
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21921..22952
|
dihydroorotase, homodimeric type (EC:3.5.2.3)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU003440}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00219};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU00
dihydroorotase n=1 Tax=Variovorax paradoxus RepID=UPI00035E79A4
|
|
cn_combo_scaffold_120_22
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22949..23749
|
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VAK6_VARPE
Variovorax paradoxus strain MEDvA23 contig_26, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ32737.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
hypothetical protein
|
|
cn_combo_scaffold_120_23
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23746..24501
|
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI000362045A
Uncharacterized protein {ECO:0000313|EMBL:EJL69222.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.
transmembrane protein
|
|
cn_combo_scaffold_120_24
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24605..25480
|
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkhol
heat shock protein HtpX n=1 Tax=Variovorax paradoxus RepID=UPI000375D08E
heat shock protein HtpX
|
|
cn_combo_scaffold_120_25
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25543..26532)
|
Activator of osmoprotectant transporter ProP n=1 Tax=Variovorax sp. CF313 RepID=J3CDF4_9BURK
Activator of osmoprotectant transporter ProP {ECO:0000313|EMBL:EJL69226.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="
fertility inhibition fino-like protein
|
|
cn_combo_scaffold_120_26
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26584..27213)
|
Conserved protein of DIM6/NTAB family n=1 Tax=Variovorax sp. CF313 RepID=J2SUD8_9BURK
Conserved protein of DIM6/NTAB family {ECO:0000313|EMBL:EJL69227.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo
flavin reductase domain-containing protein
|
|
cn_combo_scaffold_120_27
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27222..27791)
|
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI00037CF4A0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU35121.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var
|
|
cn_combo_scaffold_120_28
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27791..29476)
|
FAD-dependent dehydrogenase n=1 Tax=Variovorax sp. CF313 RepID=J2K7L8_9BURK
FAD-dependent dehydrogenase {ECO:0000313|EMBL:EJL69228.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF
fad dependent oxidoreductase
|
|
cn_combo_scaffold_120_29
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29513..30433)
|
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Var
cysteine synthase n=1 Tax=Variovorax paradoxus RepID=UPI00037834ED
cysteine synthase a
|
|
cn_combo_scaffold_120_30
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30505..31023)
|
methionine sulfoxide reductase B n=1 Tax=Pseudomonas sp. CBZ-4 RepID=UPI00034C9C34
methionine sulfoxide reductase
Methionine sulfoxide reductase {ECO:0000313|EMBL:AKC71703.1}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxal
|