Alias: VAR87_11
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
cn_combo_scaffold_112_1
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(258..800)
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2JMK9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL69095.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.
hypothetical protein
|
|
cn_combo_scaffold_112_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
919..1899
|
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V078_VARPE
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADU34392.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo
|
|
cn_combo_scaffold_112_3
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1913..2086)
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2SU33_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL69097.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va
hypothetical protein
|
|
cn_combo_scaffold_112_4
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2213..3019
|
Putative phosphohydrolase n=1 Tax=Variovorax sp. CF313 RepID=J2K7A4_9BURK
Putative phosphohydrolase {ECO:0000313|EMBL:EJL69098.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF31
metallophosphoesterase
|
|
cn_combo_scaffold_112_5
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3127..4623
|
amidase (EC:6.3.5.-)
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit n=1 Tax=Variovorax sp. CF313 RepID=J3CCX7_9BURK
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit {ECO:0000313|EMBL:EJL69099.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Coma
|
|
cn_combo_scaffold_112_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4636..5253)
|
Regulatory protein TetR n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V075_VARPE
Variovorax paradoxus strain MEDvA23 contig_74, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ24254.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
TetR family transcriptional regulator
|
|
cn_combo_scaffold_112_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5340..6074)
|
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2JML4_9BURK
Variovorax paradoxus strain MEDvA23 contig_74, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ24253.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
GntR family transcriptional regulator
|
|
cn_combo_scaffold_112_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6337..7671
|
Rieske (2Fe-2S) iron-sulfur domain n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V073_VARPE
Variovorax paradoxus strain MEDvA23 contig_74, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ24252.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
rieske (2fe-2S) iron-sulfur domain
|
|
cn_combo_scaffold_112_9
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7682..9130
|
Glutamine synthetase n=1 Tax=Variovorax sp. CF313 RepID=J2SU37_9BURK
Glutamine synthetase {ECO:0000313|EMBL:EJL69102.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative glutamate--ammonia ligase
|
|
cn_combo_scaffold_112_10
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9150..9473
|
ferredoxin n=1 Tax=Variovorax paradoxus RepID=UPI00035E9D74
Ferredoxin {ECO:0000313|EMBL:EJL69103.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative ferredoxin
|
|
cn_combo_scaffold_112_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9569..10762
|
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI0003745999
putative high-affinity branched-chain amino acid ABC transporter, branched-chain amino acid-binding protein
Putative high-affinity branched-chain amino acid ABC transporter, branched-chain amino acid-binding protein {ECO:0000313|EMBL:AGU47301.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteoba
|
|
cn_combo_scaffold_112_12
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10830..11690
|
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Variovorax sp. CF313 RepID=J2JML7_9BURK
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:EJL69105.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadac
putative high-affinity branched-chain amino acid ABC transporter, permease protein
|
|
cn_combo_scaffold_112_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11687..12649
|
Inner-membrane translocator n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V068_VARPE
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ADU34382.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradox
|
|
cn_combo_scaffold_112_14
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12646..13416
|
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Variovorax sp. CF313 RepID=J2SU40_9BURK
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EJL69107.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
putative high-affinity branched-chain amino acid ABC transporter, ATP-binding protein
|
|
cn_combo_scaffold_112_15
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13409..14113
|
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Variovorax sp. CF313 RepID=J2K7B3_9BURK
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EJL69108.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
ABC transporter
|
|
cn_combo_scaffold_112_16
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14219..15376)
|
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00036F679E
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJL69517.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho
putative extracellular ligand-binding receptor
|
|
cn_combo_scaffold_112_17
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15480..16832)
|
Cytochrome c551 peroxidase (EC:1.11.1.5)
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG22111.1}; EC=1.11.1.5 {ECO:0000313|EMBL:AJG22111.1};; TaxID=68895 species="Bacteria; Proteobacteria; Bet
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000382DF50
|
|
cn_combo_scaffold_112_18
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16829..18397)
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036F00C3
Serine/threonine protein phosphatase {ECO:0000313|EMBL:KJK20531.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae b
calcineurin-like phosphoesterase family protein
|
|
cn_combo_scaffold_112_19
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18493..20076)
|
phospholipase n=1 Tax=Variovorax paradoxus RepID=UPI00036B9131
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase {ECO:0000313|EMBL:EJL69518.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderi
phospholipase d/transphosphatidylase
|
|
cn_combo_scaffold_112_20
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20162..21391
|
Putative membrane protein required for spore maturation n=1 Tax=Variovorax sp. CF313 RepID=J3CDL8_9BURK
Putative membrane protein required for spore maturation {ECO:0000313|EMBL:EJL69519.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
nucleoside recognition domain-containing protein
|
|
cn_combo_scaffold_112_21
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21373..23364)
|
Alkyl sulfatase-like hydrolase n=1 Tax=Variovorax sp. CF313 RepID=J2JNZ0_9BURK
Alkyl sulfatase-like hydrolase {ECO:0000313|EMBL:EJL69520.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" sou
steroL-binding domain-containing protein
|
|
cn_combo_scaffold_112_22
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23438..24367
|
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J3CDZ7_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EJL69521.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="
LysR family transcriptional regulator
|
|
cn_combo_scaffold_112_23
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24478..24921
|
Conserved protein of DIM6/NTAB family n=1 Tax=Variovorax sp. CF313 RepID=J2SVE1_9BURK
Conserved protein of DIM6/NTAB family {ECO:0000313|EMBL:EJL69522.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax
flavin reductase-like domain-containing protein
|
|
cn_combo_scaffold_112_24
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24918..25418
|
Putative periplasmic or secreted lipoprotein n=1 Tax=Variovorax sp. CF313 RepID=J2K8J4_9BURK
Putative periplasmic or secreted lipoprotein {ECO:0000313|EMBL:EJL69523.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Var
putative periplasmic phospholipid-binding protein
|
|
cn_combo_scaffold_112_25
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25510..26418
|
DMT(Drug/metabolite transporter) superfamily permease n=1 Tax=Variovorax sp. CF313 RepID=J3CDM1_9BURK
DMT(Drug/metabolite transporter) superfamily permease {ECO:0000313|EMBL:EJL69524.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonada
hypothetical protein
|
|
cn_combo_scaffold_112_26
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26415..27368
|
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=1144315 species="Bacteria; Proteobacte
glutaminase, core (EC:3.5.1.2)
Glutaminase n=1 Tax=Variovorax sp. CF313 RepID=J2JNZ5_9BURK
|
|
cn_combo_scaffold_112_27
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27382..28374)
|
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Variovorax sp. CF313 RepID=J3CDZ9_9BURK
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:EJL69526.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variov
NADH(P)-binding domain-containing protein
|
|
cn_combo_scaffold_112_28
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28470..29417
|
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2SVE4_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EJL69527.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF31
LysR family transcriptional regulator
|
|
cn_combo_scaffold_112_29
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29414..29908
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000372C2EB
Uncharacterized protein {ECO:0000313|EMBL:EJL69528.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.
hypothetical protein
|
|
cn_combo_scaffold_112_30
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30287..31480
|
Putative high-affinity branched-chain amino acid ABC transporter, branched-chain amino acid-binding protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X4C3_VARPD
putative high-affinity branched-chain amino acid ABC transporter, branched-chain amino acid-binding protein
Putative high-affinity branched-chain amino acid ABC transporter, branched-chain amino acid-binding protein {ECO:0000313|EMBL:AGU47286.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteoba
|