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cn_combo_scaffold_144

Alias: VAR87_12

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Displaying items 1-30 of 223 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_144_1
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..114)
DNA (114bp) protein (38aa)
electron transfer flavoprotein subunit beta n=1 Tax=Variovorax paradoxus RepID=UPI000372A643
electron transfer flavoprotein subunit beta
Uncharacterized protein {ECO:0000313|EMBL:EXU78427.1}; Flags: Fragment;; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Coma
cn_combo_scaffold_144_2
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(251..1531)
DNA (1281bp) protein (427aa)
Small-conductance mechanosensitive channel n=1 Tax=Variovorax sp. CF313 RepID=J2K9G0_9BURK
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:EJL76895.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Vario
mechanosensitive ion channel MscS
cn_combo_scaffold_144_3
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1571..2524)
DNA (954bp) protein (318aa)
Deacetylase, histone deacetylase/acetoin utilization protein n=1 Tax=Variovorax sp. CF313 RepID=J3CR80_9BURK
Deacetylase, histone deacetylase/acetoin utilization protein {ECO:0000313|EMBL:EJL76894.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variov
putative deacetylase, histone deacetylase family
cn_combo_scaffold_144_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2598..3518
DNA (921bp) protein (307aa)
ATPase AAA n=1 Tax=Variovorax paradoxus RepID=UPI00037A0744
Variovorax paradoxus strain MEDvA23 contig_132, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16750.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamon
ATPase
cn_combo_scaffold_144_5
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3515..4492
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2TEV4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL76892.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.
hypothetical protein
cn_combo_scaffold_144_6
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4511..6532
DNA (2022bp) protein (674aa)
Transglutaminase-like enzyme, predicted cysteine protease n=1 Tax=Variovorax sp. CF313 RepID=J3CRQ7_9BURK
Transglutaminase-like enzyme, predicted cysteine protease {ECO:0000313|EMBL:EJL76891.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovora
transglutaminase
cn_combo_scaffold_144_7
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6604..7686
DNA (1083bp) protein (361aa)
Lytic murein transglycosylase B n=1 Tax=Variovorax sp. CF313 RepID=J2K9F5_9BURK
Lytic murein transglycosylase B {ECO:0000313|EMBL:EJL76890.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" so
lytic murein transglycosylase b
cn_combo_scaffold_144_8
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7683..8312
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CR77_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL76889.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.
hypothetical protein
cn_combo_scaffold_144_9
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8322..8810)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036CDD26
Uncharacterized protein {ECO:0000313|EMBL:EJL76888.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.
hypothetical protein
cn_combo_scaffold_144_10
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8807..9877)
DNA (1071bp) protein (357aa)
3-oxoacyl-(Acyl-carrier-protein) synthase n=1 Tax=Variovorax sp. CF313 RepID=J2TEV2_9BURK
3-oxoacyl-(Acyl-carrier-protein) synthase {ECO:0000313|EMBL:EJL76887.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variov
beta-ketoacyl synthase
cn_combo_scaffold_144_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9874..10155)
DNA (282bp) protein (94aa)
Acyl carrier protein n=1 Tax=Variovorax sp. CF313 RepID=J3CRQ4_9BURK
Variovorax paradoxus strain MEDvA23 contig_132, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16757.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamon
phosphopantetheine-binding protein
cn_combo_scaffold_144_12
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10152..11309)
DNA (1158bp) protein (386aa)
ABC-type multidrug transport system, permease component n=1 Tax=Variovorax sp. CF313 RepID=J2K9F3_9BURK
ABC-type multidrug transport system, permease component {ECO:0000313|EMBL:EJL76885.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.
ABC transporter
cn_combo_scaffold_144_13
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11321..12229)
DNA (909bp) protein (303aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Variovorax sp. CF313 RepID=J3CR74_9BURK
ABC transporter, ATP-binding protein
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:EJL76884.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;"
cn_combo_scaffold_144_14
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12229..13209)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2KV37_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL76883.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.
hypothetical protein
cn_combo_scaffold_144_15
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13206..13601)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2TEU8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL76882.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.
hypothetical protein
cn_combo_scaffold_144_16
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13604..14740)
DNA (1137bp) protein (379aa)
3-oxoacyl-(Acyl-carrier-protein) synthase III n=1 Tax=Variovorax sp. CF313 RepID=J3CRQ1_9BURK
3-oxoacyl-(Acyl-carrier-protein) synthase III {ECO:0000313|EMBL:EJL76881.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source=
3-oxoacyl-[acyl-carrier-protein (ACP)] synthase 3 domain-containing protein
cn_combo_scaffold_144_17
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14730..15788)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2K9E7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL76880.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va
hypothetical protein
cn_combo_scaffold_144_18
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15850..17433)
DNA (1584bp) protein (528aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; C
glyceroL-3-phosphate dehydrogenase (EC:1.1.5.3)
Glycerol-3-phosphate dehydrogenase n=1 Tax=Variovorax sp. CF313 RepID=J2KV28_9BURK
cn_combo_scaffold_144_19
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17623..18393
DNA (771bp) protein (257aa)
Transcriptional regulator of sugar metabolism n=1 Tax=Variovorax sp. CF313 RepID=J2TEU2_9BURK
Transcriptional regulator of sugar metabolism {ECO:0000313|EMBL:EJL76872.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source=
DeoR family transcriptional regulator
cn_combo_scaffold_144_20
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18418..19914
DNA (1497bp) protein (499aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:
glycerol kinase n=1 Tax=Variovorax paradoxus RepID=UPI000372FFC2
glycerol kinase
cn_combo_scaffold_144_21
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19945..20406)
DNA (462bp) protein (154aa)
peptide-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI000370635D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS20017.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var
cn_combo_scaffold_144_22
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20685..22259
DNA (1575bp) protein (525aa)
sulfatase n=1 Tax=Variovorax paradoxus RepID=UPI000368F010
Variovorax paradoxus strain MEDvA23 contig_46, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29012.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
sulfatase
cn_combo_scaffold_144_23
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22297..23253)
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035F50B0
Uncharacterized protein {ECO:0000313|EMBL:EJL76868.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.
hypothetical protein
cn_combo_scaffold_144_24
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23267..24766)
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2TEU0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL76867.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.
hypothetical protein rbh
cn_combo_scaffold_144_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24866..25714)
DNA (849bp) protein (283aa)
enoyl-CoA hydratase n=1 Tax=Variovorax paradoxus RepID=UPI0003618A74
enoyL-CoA hydratase/isomerase rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ADU36420.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" sourc
cn_combo_scaffold_144_26
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25858..28326)
DNA (2469bp) protein (823aa)
DNA internalization-related competence protein ComEC/Rec2 n=1 Tax=Variovorax sp. CF313 RepID=J3CRP0_9BURK
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:EJL76866.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamo
putative DNA internalization-like competence protein ComEC/Rec2
cn_combo_scaffold_144_27
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28467..31994
DNA (3528bp) protein (1176aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2K9D5_9BURK
Variovorax paradoxus strain MEDvA23 contig_46, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29008.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
hypothetical protein
cn_combo_scaffold_144_28
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32059..34794
DNA (2736bp) protein (912aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CR59_9BURK
Variovorax paradoxus strain MEDvA23 contig_46, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29007.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
hypothetical protein
cn_combo_scaffold_144_29
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34917..35741
DNA (825bp) protein (275aa)
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Variovorax sp. CF313 RepID=J2JLA4_9BURK
Periplasmic component of amino acid ABC-type transporter/signal transduction system {ECO:0000313|EMBL:EJL68660.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteri
family 3 extracellular solute-binding protein
cn_combo_scaffold_144_30
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35777..36733
DNA (957bp) protein (319aa)
Transglutaminase-like enzyme, predicted cysteine protease n=1 Tax=Variovorax sp. CF313 RepID=J3CCG1_9BURK
Transglutaminase-like enzyme, predicted cysteine protease {ECO:0000313|EMBL:EJL68661.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamo
transglutaminase
Displaying items 1-30 of 223 in total

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