Alias: VAR87_16
name | lists | location/seqs | annotations | notes |
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cn_combo_scaffold_116_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(1..117)
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Small GTP-binding protein domain containing protein n=1 Tax=Variovorax sp. CF313 RepID=J3CSD6_9BURK
translation elongation factor tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria
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cn_combo_scaffold_116_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(260..2359)
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Elongation factor G n=1 Tax=Variovorax paradoxus (strain S110) RepID=EFG_VARPS
Elongation factor G {ECO:0000255|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000255|HAMAP-Rule:MF_00054};; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
translation elongation factor G
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cn_combo_scaffold_116_3
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(2456..2929)
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30S ribosomal protein S7 n=2 Tax=Variovorax RepID=RS7_VARPS
30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. C
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cn_combo_scaffold_116_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(3083..3391)
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30S ribosomal protein S12 n=1 Tax=Curvibacter lanceolatus RepID=UPI0001056121
30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variov
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cn_combo_scaffold_116_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(3668..4837)
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beta-lactamase (EC:3.5.2.6)
Beta-lactamase {ECO:0000313|EMBL:ADU39754.1}; EC=3.5.2.6 {ECO:0000313|EMBL:ADU39754.1};; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamon
Beta-lactamase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VBF4_VARPE
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cn_combo_scaffold_116_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(4878..5510)
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alpha/beta hydrolase n=1 Tax=Variovorax paradoxus RepID=UPI00037A70FA
Variovorax paradoxus strain MEDvA23 contig_86, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ21732.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
transmembrane protein
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cn_combo_scaffold_116_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(5547..5900)
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Ferredoxin-like protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VBF6_VARPE
ferredoxin-like protein
Ferredoxin-like protein {ECO:0000313|EMBL:ADU39756.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (
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cn_combo_scaffold_116_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(5910..7067)
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Putative integral membrane protein n=1 Tax=Variovorax sp. CF313 RepID=J2L118_9BURK
Variovorax paradoxus strain MEDvA23 contig_69, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25360.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
vanz family protein
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cn_combo_scaffold_116_9
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(7079..7507)
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Putative membrane protein n=1 Tax=Variovorax sp. CF313 RepID=J3CUU1_9BURK
Putative membrane protein {ECO:0000313|EMBL:EJL78964.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="
hypothetical protein
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cn_combo_scaffold_116_10
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
7875..8861
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Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiale
hemB; delta-aminolevulinic acid dehydratase HemB (EC:4.2.1.24)
delta-aminolevulinic acid dehydratase n=1 Tax=Variovorax paradoxus RepID=UPI0003660921
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cn_combo_scaffold_116_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
8881..10047
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magnesium transporter CorA n=1 Tax=Variovorax paradoxus RepID=UPI00037B2BA4
mg2 transporter protein cora family protein
Mg2 transporter protein CorA family protein {ECO:0000313|EMBL:ADU39760.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va
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cn_combo_scaffold_116_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(10135..10503)
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Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XIL9_VARPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU52164.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus
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cn_combo_scaffold_116_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(10723..11049)
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alpha/beta hydrolase n=1 Tax=Variovorax paradoxus RepID=UPI00037DF6B6
CLR family protein
Uncharacterized protein {ECO:0000313|EMBL:ADU39762.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var
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cn_combo_scaffold_116_14
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
11167..12075
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Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2L123_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EJL78968.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF31
LysR family transcriptional regulator
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cn_combo_scaffold_116_15
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(12120..12803)
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carboxymethylenebutenolidase (EC:3.1.1.45)
Dienelactone hydrolase-like enzyme n=1 Tax=Variovorax sp. CF313 RepID=J3CUU6_9BURK
Dienelactone hydrolase-like enzyme {ECO:0000313|EMBL:EJL78969.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax
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cn_combo_scaffold_116_16
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(12856..13461)
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2-hydroxychromene-2-carboxylate isomerase n=1 Tax=Variovorax sp. CF313 RepID=J2KFH8_9BURK
2-hydroxychromene-2-carboxylate isomerase {ECO:0000313|EMBL:EJL78970.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variov
dsba oxidoreductase
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cn_combo_scaffold_116_17
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
13533..14279
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Putative dehydrogenase/reductase n=1 Tax=Variovorax paradoxus B4 RepID=T1XI01_VARPD
short-chain dehydrogenase/reductase SDR
Putative dehydrogenase/reductase {ECO:0000313|EMBL:AGU52168.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax p
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cn_combo_scaffold_116_18
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
14283..14936
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membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI000372A68F
multiple antibiotic resistance (marc)-like protein
UPF0056 inner membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax pa
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cn_combo_scaffold_116_19
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(14945..15418)
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thymocyte nuclear protein 1 n=1 Tax=Variovorax paradoxus RepID=UPI000378BCC1
EVE domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:EJL78973.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.
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cn_combo_scaffold_116_20
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(15426..16592)
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ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00035E68BC
extracellular ligand-binding receptor
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ADU39769.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.
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cn_combo_scaffold_116_21
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(16627..18483)
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AMP-forming long-chain acyl-CoA synthetase n=1 Tax=Variovorax sp. CF313 RepID=J2KFI5_9BURK
AMP-forming long-chain acyl-CoA synthetase {ECO:0000313|EMBL:EJL78975.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va
AMP-dependent synthetase and ligase
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cn_combo_scaffold_116_22
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(18492..19265)
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ABC transporter related protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VBH1_VARPE
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADU39771.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax par
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cn_combo_scaffold_116_23
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(19534..20355)
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branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00035E53A7
Variovorax paradoxus strain MEDvA23 contig_69, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25348.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
putative branched-chain amino acid ABC transporter, ATP-binding protein
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cn_combo_scaffold_116_24
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(20352..21428)
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ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI000368FDD2
putative branched-chain amino acid ABC transporter, permease protein
Putative branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:AGU52175.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae
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cn_combo_scaffold_116_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(21436..22311)
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ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI00037E3877
inner-membrane translocator
Putative branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:AGU52176.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae
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cn_combo_scaffold_116_26
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(22326..23156)
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AraC family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00035E26E6
transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AGU52177.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variov
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cn_combo_scaffold_116_27
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(23268..24209)
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acetyl hydrolase n=1 Tax=Variovorax paradoxus RepID=UPI0003605176
alpha/beta hydrolase folD-3 domain-containing protein
Alpha/beta hydrolase fold-3 domain protein {ECO:0000313|EMBL:ADU39776.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var
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cn_combo_scaffold_116_28
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(24273..25475)
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Phosphoribosylglycinamide formyltransferase 2 {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083136}; Short=GART 2 {ECO:0000256|HAMAP-Rule:MF_01643};; EC=2.1.2.- {ECO:0000256|HAMAP-Rule:MF_0
phosphoribosylglycinamide formyltransferase 2 (EC:4.1.1.21)
Phosphoribosylglycinamide formyltransferase 2 n=1 Tax=Variovorax sp. CF313 RepID=J2TK87_9BURK
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cn_combo_scaffold_116_29
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
25654..26502
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hbd; 3-hydroxybutyryl-CoA dehydrogenase Hbd (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Variovorax paradoxus RepID=UPI000379069B
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EJL78983.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" so
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cn_combo_scaffold_116_30
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
26537..27352
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Enoyl-CoA hydratase/isomerase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VBH9_VARPE
Variovorax paradoxus strain MEDvA23 contig_69, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25341.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
enoyL-CoA hydratase/isomerase
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