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cn_combo_scaffold_183

Alias: VAR87_17

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Displaying items 1-30 of 127 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_183_1
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..463
DNA (462bp) protein (154aa)
ArsC family transcriptional regulator n=1 Tax=Ralstonia sp. AU12-08 RepID=S9RXQ8_9RALS
ArsC family transcriptional regulator {ECO:0000313|EMBL:EPX96652.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralsto
Protein-tyrosine phosphatase, low molecular weight
cn_combo_scaffold_183_2
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

468..1511
DNA (1044bp) protein (348aa)
Putative sodium bile acid symporter family protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IET5_BORPD
sodium bile acid symporter family protein
Putative sodium bile acid symporter family protein {ECO:0000313|EMBL:CAP44902.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" sou
cn_combo_scaffold_183_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1501..2214
DNA (714bp) protein (238aa)
Putative arsenical resistance protein ArsH n=1 Tax=Variovorax paradoxus B4 RepID=T1X995_VARPD
arsH1; putative arsenical resistance protein ArsH
Putative arsenical resistance protein ArsH {ECO:0000313|EMBL:AGU49098.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va
cn_combo_scaffold_183_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2231..3430
DNA (1200bp) protein (400aa)
Putative transporter, MFS-type n=1 Tax=Variovorax paradoxus B4 RepID=T1X9X2_VARPD
putative transporter, MFS-type
Putative transporter, MFS-type {ECO:0000313|EMBL:AGU49099.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax par
cn_combo_scaffold_183_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3569..3904)
DNA (336bp) protein (112aa)
UPF0060 membrane protein WQQ_04550 n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T958_9GAMM
UPF0060 membrane protein RT97_26805 {ECO:0000256|HAMAP-Rule:MF_00010}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo
hypothetical protein
cn_combo_scaffold_183_6
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4333..4698
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QGA1_9CYAN
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
hypothetical protein
cn_combo_scaffold_183_7
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

4712..5173
DNA (462bp) protein (154aa)
MerR family transcriptional regulator n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QK10_9CYAN
zntR; MerR family transcriptional regulator
MerR family transcriptional regulator {ECO:0000313|EMBL:AGY57944.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.
cn_combo_scaffold_183_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5333..5728)
DNA (396bp) protein (132aa)
Transcriptional regulator, MerR family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9N7_ALIDK
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:AEB84537.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Ali
cn_combo_scaffold_183_9
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5800..6141
DNA (342bp) protein (114aa)
Mercuric transport protein MerT n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9N6_ALIDK
Mercury transporter MerT {ECO:0000313|EMBL:KIL02515.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri
mercuric transport protein MerT
cn_combo_scaffold_183_10
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6152..6430
DNA (279bp) protein (93aa)
Mercuric transport protein periplasmic component n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9N5_ALIDK
Periplasmic mercury ion-binding protein {ECO:0000256|RuleBase:RU361212}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
mercuric transport periplasmic protein
cn_combo_scaffold_183_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6427..6657
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9N4_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB84534.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
cn_combo_scaffold_183_12
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6823..8772)
DNA (1950bp) protein (650aa)
Iron permease FTR1 n=2 Tax=Delftia acidovorans RepID=A9BR70_DELAS
Iron permease {ECO:0000313|EMBL:KEH09222.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
iron permease FTR1
cn_combo_scaffold_183_13
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8902..11832)
DNA (2931bp) protein (977aa)
Cadmium-translocating P-type ATPase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XIB8_DELAC
Cadmium-translocating P-type ATPase {ECO:0000313|EMBL:EPD44957.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acido
heavy metal translocating P-type ATPase
cn_combo_scaffold_183_14
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12021..12425
DNA (405bp) protein (135aa)
MerR family transcriptional regulator n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RVI6_COMTE
MerR family transcriptional regulator {ECO:0000313|EMBL:KGG82325.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas te
transcriptional regulator, MerR family
cn_combo_scaffold_183_15

Not on your lists

12966..15608
DNA (2643bp) protein (881aa)
Heavy metal translocating P-type ATPase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5K0_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:KKO01624.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ATPase
cn_combo_scaffold_183_16
unknown

Not on your lists

comp(15662..15901)
DNA (240bp) protein (80aa)

This feature has no annotations

cn_combo_scaffold_183_17
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15944..16855)
DNA (912bp) protein (304aa)
Cation diffusion facilitator family transporter n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D5F0_9BURK
Variovorax paradoxus strain MEDvA23 contig_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ36826.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad
czcD; cobalt-zinc-cadmium resistance protein czcD
cn_combo_scaffold_183_18
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17360..17698)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5K2_ACIDE
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:EER60243.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax de
nitrogen regulatory protein P-II
cn_combo_scaffold_183_19
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17695..20820)
DNA (3126bp) protein (1042aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5K3_ACIDE
Cation efflux system protein CzcA {ECO:0000313|EMBL:EWS56824.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
metal transporter
cn_combo_scaffold_183_20
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20838..22055)
DNA (1218bp) protein (406aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5K4_ACIDE
Cation efflux system protein CzcB {ECO:0000313|EMBL:EWS61988.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
secretion protein HlyD
cn_combo_scaffold_183_21
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22052..23371)
DNA (1320bp) protein (440aa)
Outer membrane efflux protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5K5_ACIDE
Outer membrane efflux protein {ECO:0000313|EMBL:EER60246.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sourc
transporter
cn_combo_scaffold_183_22
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24268..25980)
DNA (1713bp) protein (571aa)
Phosphoethanolamine transferase EptA {ECO:0000313|EMBL:EWS61981.1}; EC=2.7.-.- {ECO:0000313|EMBL:EWS61981.1};; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Met
Phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W717_ACISJ
phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase
cn_combo_scaffold_183_23
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26198..26881
DNA (684bp) protein (228aa)
Heavy metal response regulator n=1 Tax=Variovorax sp. CF313 RepID=J2L499_9BURK
Heavy metal response regulator {ECO:0000313|EMBL:EJL80028.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp.
DNA-binding heavy metal response regulator
cn_combo_scaffold_183_24
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26878..28206
DNA (1329bp) protein (443aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Va
Heavy metal sensor kinase n=1 Tax=Variovorax sp. CF313 RepID=J3CWQ9_9BURK
heavy metal sensor signal transduction histidine kinase
cn_combo_scaffold_183_25
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28373..28738)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2K4R4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL75175.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va
hypothetical protein
cn_combo_scaffold_183_26
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29014..29439)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2TN37_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL80032.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va
hypothetical protein
cn_combo_scaffold_183_27
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29558..29977)
DNA (420bp) protein (140aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
hypothetical protein id=12551654 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
cn_combo_scaffold_183_28
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30044..33292)
DNA (3249bp) protein (1083aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V615_VARPE
Cation transporter {ECO:0000313|EMBL:EYC50051.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str.
CzcA family heavy metal efflux pump
cn_combo_scaffold_183_29
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33305..34900)
DNA (1596bp) protein (532aa)
RND family efflux transporter MFP subunit n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYT5_9BURK
Hemolysin D {ECO:0000313|EMBL:EYC50050.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagar
RND family efflux transporter MFP subunit
cn_combo_scaffold_183_30
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34910..36214)
DNA (1305bp) protein (435aa)
Outer membrane protein n=1 Tax=Variovorax sp. CF313 RepID=J2KN38_9BURK
Cobalt-zinc-cadmium resistance protein {ECO:0000313|EMBL:EYC50049.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylem
czcC; putative cobalt-zinc-cadmium resistance protein CzcC
Displaying items 1-30 of 127 in total

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