Alias: VAR87_35
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
cn_combo_scaffold_956_1
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
2..394
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ABC-type dipeptide/oligopeptide/nickel transport system, permease component (Fragment) n=1 Tax=Variovorax sp. CF313 RepID=J2JHC8_9BURK
binding-protein-dependent transport systems inner membrane component
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EJL67330.1}; Flags: Precursor; Fragment;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacte
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cn_combo_scaffold_956_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
402..1409
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peptide ABC transporter ATP-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI000369688A
Variovorax paradoxus strain MEDvA23 contig_97, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ20565.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
oligopeptide/dipeptide ABC transporter ATPase
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cn_combo_scaffold_956_3
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
1406..2221
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peptide ABC transporter ATP-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI0003677269
ATPase component of various ABC-type transport systems with duplicated ATPase domain {ECO:0000313|EMBL:EJL73732.1}; Flags: Fragment;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteri
putative oligopeptide/dipeptide ABC transporter, ATP-binding protein
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cn_combo_scaffold_956_4
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
2268..3761
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ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI000362BE56
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:EJL73731.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comam
family 5 extracellular solute-binding protein
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cn_combo_scaffold_956_5
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
3766..5169
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amidase n=1 Tax=Variovorax paradoxus RepID=UPI00036D4A35
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit {ECO:0000313|EMBL:EJL73730.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovo
amidase
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cn_combo_scaffold_956_6
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
5194..6642
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NAD-dependent aldehyde dehydrogenase n=1 Tax=Variovorax sp. CF313 RepID=J3CL18_9BURK
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:EJL73729.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovor
aldehyde dehydrogenase
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cn_combo_scaffold_956_7
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
6652..7542
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2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase n=1 Tax=Variovorax sp. CF313 RepID=J2KKX1_9BURK
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:EJL73728.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
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cn_combo_scaffold_956_8
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(7994..8665)
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Phosphoglycolate phosphatase {ECO:0000256|SAAS:SAAS00077902}; EC=3.1.3.18 {ECO:0000256|SAAS:SAAS00077902};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamo
TmRNA n=1 Tax=Variovorax sp. CF313 RepID=J2KG30_9BURK
phosphoglycolate phosphatase
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cn_combo_scaffold_956_9
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(8662..9381)
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ubiquinone biosynthesis o-methyltransferase (EC:2.1.1.64)
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Variovorax sp. CF313 RepID=J3CV62_9BURK
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiqui
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cn_combo_scaffold_956_10
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(9511..10161)
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membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI0003796FB3
Outer membrane protein/peptidoglycan-associated lipoprotein {ECO:0000313|EMBL:EJL79148.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Coma
putative outer membrane protein OmpA/MotB
rbh
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cn_combo_scaffold_956_11
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
10386..13031
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DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkhold
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Variovorax sp. CF313 RepID=J2TKR7_9BURK
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cn_combo_scaffold_956_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
13028..13603
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Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X8E3_VARPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU48823.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus
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cn_combo_scaffold_956_13
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
13610..14740
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Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505};; Phosphohydroxythreonine
phosphoserine aminotransferase (EC:2.6.1.52)
MFS transporter n=1 Tax=Variovorax paradoxus RepID=UPI0003805039
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cn_combo_scaffold_956_14
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
14770..15894
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chorismate mutase n=1 Tax=Variovorax paradoxus RepID=UPI000373FBAA
Chorismate mutase, clade 2 {ECO:0000313|EMBL:EJL79144.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF3
chorismate mutase
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cn_combo_scaffold_956_15
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
15914..16804
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prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase n=1 Tax=Variovorax sp. CF313 RepID=J2L1M6_9BURK
Prephenate dehydrogenase {ECO:0000313|EMBL:EJL79143.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="V
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cn_combo_scaffold_956_16
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
16806..18818
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3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|RuleBase:RU000531, ECO:0000256|SAAS:SAAS00240549}; EC=2.5.1.19 {ECO:0000256|RuleBase:RU000531, ECO:0000256|SAAS:SAAS00240533};; TaxID=595537 s
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.7.4.14 2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V6N1_VARPE
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cn_combo_scaffold_956_17
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
19013..20701
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30S ribosomal protein S1 n=1 Tax=Variovorax sp. CF313 RepID=J3CVM4_9BURK
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF3
rpsA; 30S ribosomal protein S1
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cn_combo_scaffold_956_18
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
20773..21099
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transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00036F06A5
Integration host factor subunit beta {ECO:0000256|RuleBase:RU003941, ECO:0000256|SAAS:SAAS00062449}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
integration host factor subunit beta
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cn_combo_scaffold_956_19
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
21157..21495
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Putative integral membrane protein n=1 Tax=Variovorax sp. CF313 RepID=J3CV57_9BURK
Putative integral membrane protein {ECO:0000313|EMBL:EJL79139.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;"
hypothetical protein
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cn_combo_scaffold_956_20
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
21485..22654
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Putative N-acetylglucosaminyl transferase n=1 Tax=Variovorax sp. CF313 RepID=J2L1M2_9BURK
Lipopolysaccharide assembly protein B {ECO:0000256|HAMAP-Rule:MF_00994}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variov
hypothetical protein
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cn_combo_scaffold_956_21
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
22793..23110
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Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2TKQ9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL79137.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va
hypothetical protein
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cn_combo_scaffold_956_22
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
23195..23572
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Putative fluoride ion transporter CrcB n=1 Tax=Variovorax sp. CF313 RepID=J2L1L7_9BURK
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Vari
camphor resistance protein CrcB
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cn_combo_scaffold_956_23
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
23649..26597
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cation:proton antiporter n=1 Tax=Variovorax paradoxus RepID=UPI000380E026
NADH/ubiquinone/plastoquinone (complex i)
NADH/Ubiquinone/plastoquinone (Complex I) {ECO:0000313|EMBL:ADU35977.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Vari
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cn_combo_scaffold_956_24
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
26597..26947
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Multisubunit Na+/H+ antiporter, MnhC subunit n=1 Tax=Variovorax sp. CF313 RepID=J3CVL7_9BURK
Multisubunit Na+/H+ antiporter, MnhC subunit {ECO:0000313|EMBL:EJL79131.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Var
NADH-ubiquinone oxidoreductase chain 4l
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cn_combo_scaffold_956_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
27030..28748
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cation:proton antiporter n=1 Tax=Variovorax paradoxus RepID=UPI00038144A8
NADH/Ubiquinone/plastoquinone (Complex I) {ECO:0000313|EMBL:ADU35975.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovo
NADH/ubiquinone/plastoquinone (complex i)
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cn_combo_scaffold_956_26
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
28745..29236
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cation:proton antiporter n=1 Tax=Variovorax paradoxus RepID=UPI0003728621
monovalent cation/h+ antiporter subunit e
Putative monovalent cation/H+ antiporter subunit E {ECO:0000313|EMBL:ADU35974.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae
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cn_combo_scaffold_956_27
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
29233..29511
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cation:proton antiporter n=1 Tax=Variovorax paradoxus RepID=UPI00037F7650
multiple resistance and ph regulation protein f
Multiple resistance and pH regulation protein F {ECO:0000313|EMBL:ADU35973.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; V
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cn_combo_scaffold_956_28
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
29508..29879
|
cation:proton antiporter n=1 Tax=Variovorax paradoxus RepID=UPI00036F09DC
monovalent cation/proton antiporter, mnhg/phag subunit
Monovalent cation/proton antiporter, MnhG/PhaG subunit {ECO:0000313|EMBL:ADU35972.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;"
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cn_combo_scaffold_956_29
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(29902..30906)
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hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00030D29CB
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:EIM26455.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rh
Pyrimidine precursor biosynthesis enzyme
|
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cn_combo_scaffold_956_30
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
31016..31675
|
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003121337
mtrR; transcriptional regulator
Transcriptional regulatory protein {ECO:0000313|EMBL:AFK56153.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistre
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