Alias: VAR87_39
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
cn_combo_scaffold_1444_1
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria
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Not on your lists |
476..1621
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ATPase AAA Tax=RBG_16_Chloroflexi_50_9_curated
Divergent AAA domain family id=2114640 bin=GWB2_Nitrospirae_rel_47_37 species=Clostridium botulinum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
transcriptional regulator with HTH domain
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cn_combo_scaffold_1444_2
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
1757..2944
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Uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IC80_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA89905.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
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cn_combo_scaffold_1444_3
unknown
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Not on your lists |
comp(3440..4312)
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This feature has no annotations |
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cn_combo_scaffold_1444_4
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(4329..5624)
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Site-specific recombinase, phage integrase family n=1 Tax=Burkholderia multivorans CF2 RepID=J4JKQ1_9BURK
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EJO58086.1}; TaxID=985078 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Bu
Phage integrase
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cn_combo_scaffold_1444_5
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
5865..8462
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DNA mismatch repair protein MutS n=1 Tax=Variovorax sp. CF313 RepID=J2K315_9BURK
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
DNA mismatch repair protein muts
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cn_combo_scaffold_1444_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
8491..9330
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20S proteasome A and B subunits n=2 Tax=Variovorax paradoxus RepID=C5CTL9_VARPS
putative proteasome subunit
20S proteasome A and B subunits {ECO:0000313|EMBL:ACS20207.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax par
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cn_combo_scaffold_1444_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
9336..10136
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alpha/beta hydrolase n=1 Tax=Variovorax paradoxus RepID=UPI00036A51E2
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADU38306.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax p
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cn_combo_scaffold_1444_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(10152..11624)
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Putative amidase n=1 Tax=Variovorax paradoxus B4 RepID=T1XCY1_VARPD
putative amidase
Putative amidase {ECO:0000313|EMBL:AGU50792.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
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cn_combo_scaffold_1444_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(11730..12074)
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Putative branched-chain amino acid transport protein, AzlD family n=1 Tax=Variovorax paradoxus B4 RepID=T1XE10_VARPD
putative branched-chain amino acid transport protein, AzlD family
Putative branched-chain amino acid transport protein, AzlD family {ECO:0000313|EMBL:AGU50793.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; V
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cn_combo_scaffold_1444_10
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(12074..12784)
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Putative branched-chain amino acid permease, AzlC family n=1 Tax=Variovorax paradoxus B4 RepID=T1XEN6_VARPD
putative branched-chain amino acid permease, AzlC family
Putative branched-chain amino acid permease, AzlC family {ECO:0000313|EMBL:AGU50794.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax
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cn_combo_scaffold_1444_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(12811..14448)
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Putative glutathione ABC transporter, ATP-binding protein GsiA n=1 Tax=Variovorax paradoxus B4 RepID=T1XFA3_VARPD
gsiA1; putative glutathione ABC transporter, ATP-binding protein GsiA
Putative glutathione ABC transporter, ATP-binding protein GsiA {ECO:0000313|EMBL:AGU50795.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Vari
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cn_combo_scaffold_1444_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(14461..15333)
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Putative peptide ABC transporter, permease protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XE64_VARPD
putative peptide ABC transporter, permease protein
Putative peptide ABC transporter, permease protein {ECO:0000313|EMBL:AGU50796.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" so
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cn_combo_scaffold_1444_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(15347..16288)
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Putative peptide ABC transporter, permease protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XCY4_VARPD
putative peptide ABC transporter, permease protein
Putative peptide ABC transporter, permease protein {ECO:0000313|EMBL:AGU50797.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" so
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cn_combo_scaffold_1444_14
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(16293..17903)
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Putative peptide ABC transporter, peptide-binding protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XE14_VARPD
Putative peptide ABC transporter, peptide-binding protein {ECO:0000313|EMBL:AGU50798.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovora
putative peptide ABC transporter, peptide-binding protein
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cn_combo_scaffold_1444_15
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
18007..19476
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Transcriptional regulator, GntR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XEN8_VARPD
transcriptional regulator, GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AGU50799.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variov
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cn_combo_scaffold_1444_16
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
19508..19888
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Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2K319_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL74545.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.
ycii-like protein
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cn_combo_scaffold_1444_17
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
19934..20560
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acetyltransferase n=1 Tax=Variovorax paradoxus RepID=UPI00035C9DE9
Acetyltransferase {ECO:0000313|EMBL:EJL74547.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
acetyltransferase family protein
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cn_combo_scaffold_1444_18
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
20603..21307
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LuxR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI0003649820
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:EJL74548.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderia
two component LuxR family transcriptional regulator
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cn_combo_scaffold_1444_19
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
21394..23133
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histidine kinase n=1 Tax=Variovorax paradoxus RepID=UPI0003612135
Variovorax paradoxus strain MEDvA23 contig_53, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ27711.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
histidine kinase
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cn_combo_scaffold_1444_20
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(23145..23969)
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Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphat
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Variovorax sp. CF313 RepID=J3CMN3_9BURK
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cn_combo_scaffold_1444_21
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
24126..25010
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hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037A775B
Uncharacterized protein {ECO:0000313|EMBL:EJL74552.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.
hypothetical protein
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cn_combo_scaffold_1444_22
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(25002..25643)
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Asp/Glu/Hydantoin racemase n=1 Tax=Variovorax sp. CF313 RepID=J2KNA5_9BURK
Asp/Glu/Hydantoin racemase {ECO:0000313|EMBL:EJL74553.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source=
Asp/Glu racemase
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cn_combo_scaffold_1444_23
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(25657..26571)
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Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Variovorax sp. CF313 RepID=J3CMD6_9BURK
Periplasmic component of amino acid ABC-type transporter/signal transduction system {ECO:0000313|EMBL:EJL74554.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteri
family 3 extracellular solute-binding protein
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cn_combo_scaffold_1444_24
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(26625..27959)
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hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035CEFAD
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000313|EMBL:EJL74555.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovor
putative aminotransferase, class 3
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cn_combo_scaffold_1444_25
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
28104..28970
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Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J3CMN5_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EJL74556.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF31
RpiR family transcriptional regulator
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cn_combo_scaffold_1444_26
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(28989..29684)
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hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036D860E
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABQ70662.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="
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cn_combo_scaffold_1444_27
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
30026..30391
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hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036A1D18
SPW repeat protein {ECO:0000313|EMBL:EJL74557.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo
hypothetical protein
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cn_combo_scaffold_1444_28
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(30452..31945)
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Outer membrane efflux protein, NodT family n=1 Tax=Variovorax paradoxus B4 RepID=T1XFB9_VARPD
outer membrane efflux protein, NodT family
Outer membrane efflux protein, NodT family {ECO:0000313|EMBL:AGU50810.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va
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cn_combo_scaffold_1444_29
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(31956..35246)
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nodulation protein n=1 Tax=Variovorax paradoxus RepID=UPI000375C2F7
Acriflavin resistance protein {ECO:0000313|EMBL:ADU38320.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax parad
acriflavin resistance protein
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cn_combo_scaffold_1444_30
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(35243..38359)
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Acriflavin resistance protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V726_VARPE
Acriflavin resistance protein {ECO:0000313|EMBL:ADU38322.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax parad
acriflavin resistance protein
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