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cn_combo_scaffold_4765

Alias: VAR87_44

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_4765_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(131..1024)
DNA (894bp) protein (298aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase {ECO:0000256|RuleBase:RU910714}; Short=HIBADH {ECO:0000256|RuleBase:RU910714};; EC=1.1.1.31 {ECO:0000256|RuleBase:RU910714};; TaxID=595537 species="Bacteria; Proteob
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UY63_VARPE
cn_combo_scaffold_4765_2
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1070..2185)
DNA (1116bp) protein (372aa)
enoyl-CoA hydratase n=1 Tax=Variovorax paradoxus RepID=UPI000375D7FA
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:EJL73400.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Vario
enoyl-CoA hydratase/isomerase
cn_combo_scaffold_4765_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2215..3369)
DNA (1155bp) protein (385aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UY61_VARPE
acyL-CoA dehydrogenase domain-containing protein
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:ADU36591.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" sourc
cn_combo_scaffold_4765_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3366..3764)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UY60_VARPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU36590.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var
cn_combo_scaffold_4765_5
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3761..5284)
DNA (1524bp) protein (508aa)
Methylmalonic acid semialdehyde dehydrogenase n=1 Tax=Variovorax sp. CF313 RepID=J2KJZ7_9BURK
Methylmalonic acid semialdehyde dehydrogenase {ECO:0000313|EMBL:EJL73398.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source=
methylmalonate-semialdehyde dehydrogenase
cn_combo_scaffold_4765_6
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5383..6348
DNA (966bp) protein (322aa)
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2T5R6_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EJL73397.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF31
LysR family transcriptional regulator
cn_combo_scaffold_4765_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6365..7573
DNA (1209bp) protein (403aa)
aspartate aminotransferase n=1 Tax=Variovorax paradoxus RepID=UPI000367DB19
class I and II aminotransferase
Aminotransferase class I and II {ECO:0000313|EMBL:ADU36585.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax par
cn_combo_scaffold_4765_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7578..8654)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UY54_VARPE
Variovorax paradoxus strain MEDvA23 contig_28, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ32082.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
hypothetical protein
cn_combo_scaffold_4765_9
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8671..10062)
DNA (1392bp) protein (464aa)
Putative acyl-CoA transferase/carnitine dehydratase n=1 Tax=Variovorax sp. CF313 RepID=J3CKJ5_9BURK
Putative acyl-CoA transferase/carnitine dehydratase {ECO:0000313|EMBL:EJL73391.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" s
L-carnitine dehydratase/bile acid-inducible protein F
cn_combo_scaffold_4765_10
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10135..10773)
DNA (639bp) protein (213aa)
3-oxoacid CoA-transferase subunit B (EC:2.8.3.5)
3-oxoacid CoA-transferase, B subunit {ECO:0000313|EMBL:ADU36583.1}; EC=2.8.3.5 {ECO:0000313|EMBL:ADU36583.1};; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Coma
succinyl-CoA:3-ketoacid-CoA transferase n=1 Tax=Variovorax paradoxus RepID=UPI00037170DA
cn_combo_scaffold_4765_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10775..11587)
DNA (813bp) protein (271aa)
3-oxoacid CoA-transferase subunit A (EC:2.8.3.5)
3-oxoacid CoA-transferase, A subunit {ECO:0000313|EMBL:ADU36582.1}; EC=2.8.3.5 {ECO:0000313|EMBL:ADU36582.1};; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Coma
3-oxoacid CoA-transferase, A subunit n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UY52_VARPE
cn_combo_scaffold_4765_12
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11682..12248
DNA (567bp) protein (189aa)
PAS domain S-box n=1 Tax=Variovorax sp. CF313 RepID=J2KJY7_9BURK
PAS domain S-box {ECO:0000313|EMBL:EJL73388.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
LuxR family transcriptional regulator
Displaying 12 items

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