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cn_combo_scaffold_3478

Alias: XAN48_340a

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3478_1
Burkholderia sp. CCGE1003, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..456
DNA (456bp) protein (152aa)
dihydroorotase, homodimeric type (EC:3.5.2.3)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU003440}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00219};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU00
Dihydroorotase n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1T8X0_BURSG
cn_combo_scaffold_3478_2
Cardiobacterium valvarum, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(625..1134)
DNA (510bp) protein (170aa)
Antioxidant, AhpC/TSA family n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZFB1_9GAMM
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EHM54089.1}; TaxID=797473 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" source="Cardi
alkyl hydroperoxide reductase
cn_combo_scaffold_3478_3
Rheinheimera nanhaiensis, Rheinheimera, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1259..1816)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Rheinheimera nanhaiensis E407-8 RepID=I1DXD9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAB58717.1}; TaxID=562729 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Rheinheimera.;" source="Rheinheimera nanhaiensi
hypothetical protein
cn_combo_scaffold_3478_4
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1942..2394)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ24 RepID=UPI00036B8C27
diguanylate cyclase Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
cn_combo_scaffold_3478_5
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2591..4243
DNA (1653bp) protein (551aa)
diguanylate cyclase n=1 Tax=Acidovorax radicis RepID=UPI0002376974
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
cn_combo_scaffold_3478_6
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4496..4678
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003694CBF
hypothetical protein Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
hypothetical protein
cn_combo_scaffold_3478_7
unknown

Not on your lists

comp(4946..5173)
DNA (228bp) protein (76aa)

This feature has no annotations

cn_combo_scaffold_3478_8
unknown

Not on your lists

5465..6241
DNA (777bp) protein (259aa)

This feature has no annotations

cn_combo_scaffold_3478_9
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6278..6565)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI000376F786
Uncharacterized protein {ECO:0000313|EMBL:KGM53802.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeon
cn_combo_scaffold_3478_10
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6562..8688)
DNA (2127bp) protein (709aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003760E78
Uncharacterized protein {ECO:0000313|EMBL:KGM53802.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeon
ATPase
cn_combo_scaffold_3478_11
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8876..9919
DNA (1044bp) protein (348aa)
Probable murein peptide carboxypeptidase n=1 Tax=Rheinheimera nanhaiensis E407-8 RepID=I1DTF7_9GAMM
Microcin C7 resistance protein MccF {ECO:0000313|EMBL:AKC87942.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="
peptidase U61 LD-carboxypeptidase A
cn_combo_scaffold_3478_12
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10094..10375
DNA (282bp) protein (94aa)
NODE_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96987.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lys
cn_combo_scaffold_3478_13
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10611..11366
DNA (756bp) protein (252aa)
Putative cytochrome b n=1 Tax=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) RepID=Q6MRI7_BDEBA
cytochrome b Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
cytochrome b
cn_combo_scaffold_3478_14
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11311..11940
DNA (630bp) protein (210aa)
Putative uncharacterized protein n=1 Tax=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) RepID=Q6MRI6_BDEBA
hypothetical protein Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
hypothetical protein
cn_combo_scaffold_3478_15
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12194..12724
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI00037A005D
Uncharacterized protein {ECO:0000313|EMBL:KFL36269.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghae
riboflavin biosynthesis protein RibA
cn_combo_scaffold_3478_16
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12778..13440)
DNA (663bp) protein (221aa)
gst; glutathione S-transferase (EC:2.5.1.18)
Glutathione S-transferase domain-containing protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W562_9GAMM
Glutathione S-transferase {ECO:0000313|EMBL:KGM55797.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daeje
cn_combo_scaffold_3478_17
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13453..13557)
DNA (105bp) protein (35aa)
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
cn_combo_scaffold_3478_18
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13699..14421)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003669551
RNA-binding protein S4 {ECO:0000313|EMBL:AKC87110.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthom
RNA-binding S4 domain-containing protein
cn_combo_scaffold_3478_19
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14511..15368
DNA (858bp) protein (286aa)
RIO-like kinase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WWG1_PSEUU
RIO1 family serine kinase {ECO:0000313|EMBL:EYR69683.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsi
RIO-like kinase
cn_combo_scaffold_3478_20
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15408..16487
DNA (1080bp) protein (360aa)
BrkB protein n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI0003716FE7
Ribonuclease BN {ECO:0000313|EMBL:KGQ20026.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-
BrkB protein
cn_combo_scaffold_3478_21
Lysinibacillus manganicus, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16576..17484)
DNA (909bp) protein (303aa)
Cyclohexanol dehydrogenase n=1 Tax=Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831) RepID=Q8CUS3_OCEIH
Oxidoreductase {ECO:0000313|EMBL:KGR74341.1}; TaxID=1384049 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus manganicus DSM 26584.;"
cyclohexanol dehydrogenase
cn_combo_scaffold_3478_22
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17628..18059
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B4FA79
Uncharacterized protein {ECO:0000313|EMBL:KGO99439.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvi
cn_combo_scaffold_3478_23
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18166..19065
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036C0BF2
hypothetical protein Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
hypothetical protein
cn_combo_scaffold_3478_24
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19139..19504
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W0X3_9GAMM
Membrane protein {ECO:0000313|EMBL:KGM55788.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis G
transmembrane protein
cn_combo_scaffold_3478_25
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19525..20004)
DNA (480bp) protein (160aa)
3-demethylubiquinone-9 3-methyltransferase; K00568 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] Tax=RifCSPlowO2_12_Burkholderiales_67_14_
Uncharacterized protein n=1 Tax=Herbaspirillum sp. CF444 RepID=J2KUN8_9BURK
hypothetical protein
cn_combo_scaffold_3478_26
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20436..21026
DNA (591bp) protein (197aa)
Uncharacterized protein {ECO:0000313|EMBL:AKC87086.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxantho
id=2608851 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
cn_combo_scaffold_3478_27
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21287..21865
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHJ5_9GAMM
hypothetical protein Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
hypothetical protein
cn_combo_scaffold_3478_28
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21862..22587)
DNA (726bp) protein (242aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacte
ABC transporter related protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WTB8_PSEUU
ABC transporter
cn_combo_scaffold_3478_29
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22580..22936)
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WTB7_PSEUU
Membrane protein {ECO:0000313|EMBL:KFN50059.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-0
hypothetical protein
Displaying 29 items

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