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cn_combo_scaffold_1609

Alias: XAN48_5

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1609_1
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

2..1768
DNA (1767bp) protein (589aa)
Pentaphosphate guanosine-3'-pyrophosphohydrolase n=3 Tax=Xanthomonas RepID=G2LS65_9XANT
(P)ppGpp synthetase {ECO:0000313|EMBL:KIJ71254.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
spoT; pentaphosphate guanosine-3'-pyrophosphohydrolase
cn_combo_scaffold_1609_2
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1850..2230
DNA (381bp) protein (127aa)
endoribonuclease n=1 Tax=Xanthomonas RepID=UPI000262A84C
Endoribonuclease {ECO:0000313|EMBL:KGM55726.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresiste
endoribonuclease
cn_combo_scaffold_1609_3
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2256..3335
DNA (1080bp) protein (360aa)
ATP-dependent DNA helicase RecG n=1 Tax=Xanthomonas sacchari RepID=UPI000262A84D
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:KGM55316.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter
ATP-dependent DNA helicase RecG
cn_combo_scaffold_1609_4
Congregibacter litoralis, Congregibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3335..5770
DNA (2436bp) protein (812aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-602-C20 RepID=UPI00037C05EC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAQ96459.2}; TaxID=314285 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Congregibacter.;" source="Congregibacter litoralis KT
cn_combo_scaffold_1609_5
Congregibacter litoralis, Congregibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5767..8049
DNA (2283bp) protein (761aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-602-C20 RepID=UPI0003635176
Uncharacterized protein {ECO:0000313|EMBL:EAQ96460.2}; TaxID=314285 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Congregibacter.;" source="Congregibacter litoralis KT
cn_combo_scaffold_1609_6
unknown

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8046..8654
DNA (609bp) protein (203aa)

This feature has no annotations

cn_combo_scaffold_1609_7

Not on your lists

8749..10680
DNA (1932bp) protein (644aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00035C5918
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EQD67877.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
helicase domain protein
cn_combo_scaffold_1609_8
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10677..11981
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-602-C20 RepID=UPI0003754C26
Uncharacterized protein {ECO:0000313|EMBL:EJN10131.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum
hypothetical protein
cn_combo_scaffold_1609_9
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12034..12816)
DNA (783bp) protein (261aa)
Putative uncharacterized protein n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BIY0_9XANT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
hypothetical protein
cn_combo_scaffold_1609_10
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12898..13248
DNA (351bp) protein (117aa)
transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000378F2C6
Transcriptional regulator {ECO:0000313|EMBL:EYR70214.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsi
transcriptional repressor protein
cn_combo_scaffold_1609_11
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13380..14786
DNA (1407bp) protein (469aa)
2-oxoglutarate dehydrogenase, E3 component, lipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] id=12551625 bin=BDI species=Fodinicurvata sediminis genus=Fodinicurvata taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetoba
Dihydrolipoamide dehydrogenase (EC:1.8.1.4)
cn_combo_scaffold_1609_12
BJP_IG2102_ACD39_51_10, ACD39, Bacteria

Not on your lists

comp(14851..16113)
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Herbaspirillum seropedicae RepID=UPI0002DB5546
hypothetical protein
Tax=BJP_IG2102_ACD39_51_10
cn_combo_scaffold_1609_13
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16668..18290)
DNA (1623bp) protein (541aa)
nadE2; NAD synthase (glutamine-hydrolysing) (EC:6.3.5.1)
NAD synthetase n=1 Tax=Rudaea cellulosilytica RepID=UPI00037A88F2
NAD synthetase/Glutamine amidotransferase chain of NAD synthetase {ECO:0000313|EMBL:KGQ17893.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae
cn_combo_scaffold_1609_14
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18290..18700)
DNA (411bp) protein (137aa)
Transcriptional regulator, MerR family n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SIB9_METPP
MerR family transcriptional regulator {ECO:0000313|EMBL:KGM50702.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lyso
putative transcriptional regulator
cn_combo_scaffold_1609_15
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18741..20747
DNA (2007bp) protein (669aa)
Permease n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SIC0_METPP
High-affinity iron permease {ECO:0000313|EMBL:KGQ17891.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dok
pbrT; permease
cn_combo_scaffold_1609_16
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20866..21489
DNA (624bp) protein (208aa)
RND OM export protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SIC2_METPP
czcD; RND OM export protein
RND OM export protein {ECO:0000313|EMBL:ABM95311.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1)
cn_combo_scaffold_1609_17
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21596..21973
DNA (378bp) protein (126aa)
Uncharacterized protein {ECO:0000313|EMBL:KGO99907.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvi
cn_combo_scaffold_1609_18
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22033..23310
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002D64C43
Outer membrane efflux protein Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
czcC; Heavy metal RND efflux outer membrane protein, CzcC family
cn_combo_scaffold_1609_19
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23307..24320
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002EA112A
Cobalt-zinc-cadmium resistance protein {ECO:0000313|EMBL:EYR65674.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lys
putative cobalt-zinc-cadmium resistance protein
cn_combo_scaffold_1609_20
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

24310..27540
DNA (3231bp) protein (1077aa)
RND OM permease n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SIC4_METPP
Cation transporter {ECO:0000313|EMBL:KIJ71917.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
czcA; RND OM permease
cn_combo_scaffold_1609_21
bacterium YEK0313, Bacteria

Not on your lists

28051..30600
DNA (2550bp) protein (850aa)
Cadmium-exporting ATPase n=2 Tax=Mesorhizobium metallidurans RepID=I7JB61_9RHIZ
Putative cadmium-transporting ATPase {ECO:0000313|EMBL:CEJ15993.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
cadmium-exporting ATPase
cn_combo_scaffold_1609_22
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30790..31056
DNA (267bp) protein (89aa)
transposase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0003070835
Transposase {ECO:0000313|EMBL:KGO99154.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-
Transposase
cn_combo_scaffold_1609_23
Xanthomonas fragariae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31080..31904
DNA (825bp) protein (275aa)
ISxac4 transposase n=1 Tax=Xanthomonas fragariae LMG 25863 RepID=R0FW65_9XANT
ISxac4 transposase {ECO:0000313|EMBL:ENZ97264.1}; TaxID=1131451 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fragariae
transposase
Displaying 23 items

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