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cn_combo_scaffold_3015

Alias: XAN48_21

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3015_1
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..360)
DNA (360bp) protein (120aa)
Flagellar basal body rod protein FlgC n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UMZ3_PSEUP
flgC; flagellar basal body rod protein FlgC; K02388 flagellar basal-body rod protein FlgC Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
flgC; flagellar basal body rod protein FlgC
cn_combo_scaffold_3015_2
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(372..734)
DNA (363bp) protein (121aa)
Flagellar basal body rod protein FlgB n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UMZ4_PSEUP
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Ly
flgB; flagellar basal body rod protein FlgB
cn_combo_scaffold_3015_3
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(864..1778)
DNA (915bp) protein (305aa)
chemotaxis protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E9C7F8
chemotaxis protein CheW; K03415 two-component system, chemotaxis family, response regulator CheV Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
chemotaxis signal transduction protein
cn_combo_scaffold_3015_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1869..2381
DNA (513bp) protein (171aa)
Flagellar basal body P-ring biosynthesis protein FlgA n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UMZ5_PSEUP
Flagella basal body P-ring formation protein FlgA {ECO:0000256|RuleBase:RU362063}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomon
flgA; flagellar basal body P-ring biosynthesis protein FlgA
cn_combo_scaffold_3015_5
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2461..2772
DNA (312bp) protein (104aa)
Anti-sigma-28 factor FlgM family protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WST4_PSEUU
Uncharacterized protein {ECO:0000313|EMBL:KGM57378.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arsenici
anti-sigma-28 factor FlgM family protein
cn_combo_scaffold_3015_6
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2769..3104
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UMZ7_PSEUP
hypothetical protein Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
hypothetical protein
cn_combo_scaffold_3015_7
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3107..4318
DNA (1212bp) protein (404aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
two-component system sensor protein (EC:2.7.13.3)
histidine kinase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000361F38D
cn_combo_scaffold_3015_8
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4334..6094)
DNA (1761bp) protein (587aa)
c-di-GMP phosphodiesterase A n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000304A8C2
putative GGDEF EAL response regulator signalling protein Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
GGDEF EAL response regulator signalling protein
cn_combo_scaffold_3015_9
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6091..7350)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=11 Tax=Pseudomonas RepID=D5MP86_PSEPU
Uncharacterized protein {ECO:0000313|EMBL:BAJ06432.1}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (A
hypothetical protein
cn_combo_scaffold_3015_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7459..8187)
DNA (729bp) protein (243aa)
Phospholipase/carboxylesterase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4S3_9GAMM
Phospholipase/carboxylesterase {ECO:0000313|EMBL:EIL94464.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanob
putative esterase
cn_combo_scaffold_3015_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8184..8990)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4S2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94463.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
cn_combo_scaffold_3015_12
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9052..9465)
DNA (414bp) protein (138aa)
Terminal quinol oxidase membrane protein subunit n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKQ1_9GAMM
Terminal quinol oxidase membrane protein subunit {ECO:0000313|EMBL:EIL87792.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;
hypothetical protein
cn_combo_scaffold_3015_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9510..10142)
DNA (633bp) protein (211aa)
NADP oxidoreductase, coenzyme F420-dependent n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSC0_9GAMM
NADP oxidoreductase, coenzyme F420-dependent {ECO:0000313|EMBL:EIM02362.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" so
putative dinucleotide-binding enzyme
cn_combo_scaffold_3015_14
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10261..11160
DNA (900bp) protein (300aa)
LysR family transcriptional regulator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VKQ2_9GAMM
LysR family transcriptional regulator {ECO:0000313|EMBL:EIL87793.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
transcriptional regulator
cn_combo_scaffold_3015_15
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11183..11914
DNA (732bp) protein (244aa)
Helix-turn-helix motif n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82W03_NITEU
Hypothetical Protein Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
helix-hairpin-helix DNA-binding motif-containing protein
cn_combo_scaffold_3015_16
unknown

Not on your lists

11911..12153
DNA (243bp) protein (81aa)

This feature has no annotations

cn_combo_scaffold_3015_17
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12528..14039)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3G7T8_STEMA
Uncharacterized protein {ECO:0000313|EMBL:ABR91670.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacte
cn_combo_scaffold_3015_18
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14039..15040)
DNA (1002bp) protein (334aa)
Type II secretory pathway, component ExeA n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3FG17_STEMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGO99720.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvi
cn_combo_scaffold_3015_19
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15092..16951)
DNA (1860bp) protein (620aa)
Uncharacterized protein n=1 Tax=Xanthomonas oryzae pv. oryzae (strain PXO99A) RepID=B2SKL8_XANOP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGO99721.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvi
cn_combo_scaffold_3015_20
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16944..17666)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A48315
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGO99722.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvi
cn_combo_scaffold_3015_21
unknown

Not on your lists

comp(17808..17993)
DNA (186bp) protein (62aa)

This feature has no annotations

Displaying 21 items

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