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cn_combo_scaffold_3032

Alias: XAN48_22

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3032_1
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..601
DNA (600bp) protein (200aa)
DNA topoisomerase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003050C7E
Uncharacterized protein {ECO:0000313|EMBL:KFN49667.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas compost
hypothetical protein
cn_combo_scaffold_3032_2
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(502..897)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000363C31F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGO99882.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvi
cn_combo_scaffold_3032_3
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1057..2556)
DNA (1500bp) protein (500aa)
hypothetical protein n=1 Tax=Halomonas lutea RepID=UPI0003623007
Oxidoreductase {ECO:0000313|EMBL:KGQ19304.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-5
FAD dependent oxidoreductase family protein
cn_combo_scaffold_3032_4
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2590..3531)
DNA (942bp) protein (314aa)
Ku domain-containing protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D35F33
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" sou
DNA-binding protein
cn_combo_scaffold_3032_5
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3550..4569)
DNA (1020bp) protein (340aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7VE02_STEMA
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:KGQ20180.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Ly
cn_combo_scaffold_3032_6
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4619..5014)
DNA (396bp) protein (132aa)
membrane protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B3E7E1
Uncharacterized protein {ECO:0000313|EMBL:EYR68322.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
hypothetical protein
cn_combo_scaffold_3032_7
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5036..5620)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B3CFB6
RES domain-containing protein {ECO:0000313|EMBL:KGQ18204.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter d
hypothetical protein
cn_combo_scaffold_3032_8
unknown

Not on your lists

comp(5648..5848)
DNA (201bp) protein (67aa)

This feature has no annotations

cn_combo_scaffold_3032_9
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6670..8094)
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K8M3_AZOSB
Uncharacterized protein {ECO:0000313|EMBL:CAL95178.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).
hypothetical protein
cn_combo_scaffold_3032_10
unknown

Not on your lists

comp(8251..8487)
DNA (237bp) protein (79aa)

This feature has no annotations

cn_combo_scaffold_3032_11
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8466..9821)
DNA (1356bp) protein (452aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN50164.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas compost
Sigma 54-dependent transcriptional activator containing CheY-like receiver domain id=2521426 bin=GWF1_Xanthomonadales_69_6 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
cn_combo_scaffold_3032_12
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9868..10239)
DNA (372bp) protein (124aa)
Putative response regulator receiver (CheY-like protein) n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SFX7_9BRAD
Putative response regulator receiver (CheY-like protein) {ECO:0000313|EMBL:CCD93104.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizob
response regulator receiver
cn_combo_scaffold_3032_13
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10217..11797)
DNA (1581bp) protein (527aa)
Signal transduction histidine kinase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IWT7_METNO
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:GAN46185.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacteriu
signal transduction histidine kinase
cn_combo_scaffold_3032_14
unknown

Not on your lists

comp(11794..12159)
DNA (366bp) protein (122aa)

This feature has no annotations

cn_combo_scaffold_3032_15
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12431..14941)
DNA (2511bp) protein (837aa)
ATP-dependent DNA ligase (EC:6.5.1.1)
ATP-dependent DNA ligase n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A8F079
Stenotrophomonas maltophilia strain ZBG7B contig_18, whole genome shotgun sequence {ECO:0000313|EMBL:KIP86929.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; X
cn_combo_scaffold_3032_16
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14952..15554)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Ralstonia sp. PBA RepID=I9KUE4_9RALS
Uncharacterized protein {ECO:0000313|EMBL:EIZ03895.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
hypothetical protein
cn_combo_scaffold_3032_17
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15614..15892)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Deinococcus sp. 2009 RepID=UPI0003B5710D
general stress protein
General stress protein {ECO:0000313|EMBL:AHX13536.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;
cn_combo_scaffold_3032_18
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16147..16578
DNA (432bp) protein (144aa)
Putative CBS domain protein n=1 Tax=uncultured marine microorganism HF4000_APKG1C9 RepID=B3T6D9_9ZZZZ
CBS domain protein {ECO:0000313|EMBL:KGQ20444.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis
hypothetical protein
cn_combo_scaffold_3032_19
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16728..17030)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y4F6_RAMTT
hypothetical protein Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
hypothetical protein
cn_combo_scaffold_3032_20
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17294..17791
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0002ED1E57
Uncharacterized protein {ECO:0000313|EMBL:EYR70266.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
hypothetical protein
cn_combo_scaffold_3032_21
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17823..18626
DNA (804bp) protein (268aa)
Cinnamoyl ester hydrolase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WS08_PSEUU
Permease {ECO:0000313|EMBL:AKC87650.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensi
cinnamoyl ester hydrolase
cn_combo_scaffold_3032_22
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18642..18971)
DNA (330bp) protein (110aa)
otsA; putative alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15); K00697 trehalose 6-phosphate synthase [EC:2.4.1.15] Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
otsA; alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15)
alpha,alpha-trehalose-phosphate synthase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002F1BC8C
cn_combo_scaffold_3032_23
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19959..21755)
DNA (1797bp) protein (599aa)
glucoamylase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E21CFF
Glucoamylase {ECO:0000313|EMBL:AKC86107.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwon
glycoside hydrolase 15-like protein
cn_combo_scaffold_3032_24
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21752..22531)
DNA (780bp) protein (260aa)
ostB; trehalose-6-phosphate phosphatase; K01087 trehalose 6-phosphate phosphatase [EC:3.1.3.12] Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
trehalose-phosphatase n=1 Tax=Xanthomonas sacchari RepID=UPI000263010F
trehalose phosphatase
cn_combo_scaffold_3032_25
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22623..23759)
DNA (1137bp) protein (379aa)
Biotin carboxylase {ECO:0000313|EMBL:CDY77545.1}; EC=6.3.4.14 {ECO:0000313|EMBL:CDY77545.1};; Uncharacterized protein {ECO:0000313|EMBL:KDR44263.1}; TaxID=60547 species="Bacteria; Proteobacteria; Beta
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UTL3_PSEUP
hypothetical protein
cn_combo_scaffold_3032_26
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24009..24770)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00036CDA39
Flagellar brake protein YcgR {ECO:0000256|HAMAP-Rule:MF_01457}; Cyclic di-GMP binding protein YcgR {ECO:0000256|HAMAP-Rule:MF_01457}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteri
hypothetical protein
cn_combo_scaffold_3032_27
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24817..26142)
DNA (1326bp) protein (442aa)
Na+/H+-dicarboxylate symporter n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URS6_PSEUP
Amino acid:proton symporter {ECO:0000313|EMBL:EYR67050.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter cap
Na+/H+-dicarboxylate symporter
cn_combo_scaffold_3032_28
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26248..27945
DNA (1698bp) protein (566aa)
alkaline phosphatase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0003167AD0
Alkaline phosphatase {ECO:0000313|EMBL:AKC87410.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomon
phoA; alkaline phosphatase
cn_combo_scaffold_3032_29
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28153..28602)
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URS3_PSEUP
Membrane protein {ECO:0000313|EMBL:KGM52551.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis K
hypothetical protein
cn_combo_scaffold_3032_30
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28778..28891
DNA (114bp) protein (38aa)
Type 12 methyltransferase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URS2_PSEUP
Methyltransferase family protein {ECO:0000313|EMBL:KGQ19620.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacte
type 12 methyltransferase
Displaying 30 items

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