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cn_combo_scaffold_4066

Alias: XAN48_45

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_4066_1
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..247)
DNA (246bp) protein (82aa)
Major facilitator superfamily MFS_1 n=1 Tax=Shewanella sp. (strain ANA-3) RepID=A0KXN9_SHESA
MFS transporter permease {ECO:0000313|EMBL:KGM55909.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arsenic
major facilitator superfamily transporter
cn_combo_scaffold_4066_2
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(252..1280)
DNA (1029bp) protein (343aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonad
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Pseudomonas stutzeri ATCC 14405 = CCUG 16156 RepID=H7EZQ6_PSEST
gapA; Glyceraldehyde-3-phosphate dehydrogenase, type I
cn_combo_scaffold_4066_3
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1267..1527)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00037E8F76
Uncharacterized protein {ECO:0000313|EMBL:GAD62542.1}; TaxID=1215092 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcal
Redox-active disulfide protein 2
cn_combo_scaffold_4066_4
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1542..2543)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2Z447_PSEAC
Permease family protein
Uncharacterized protein {ECO:0000313|EMBL:AJE21580.1}; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroo
cn_combo_scaffold_4066_5
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2543..2905)
DNA (363bp) protein (121aa)
Transcriptional regulator, ArsR family n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WRJ5_PSEUU
ArsR family transcriptional regulator {ECO:0000313|EMBL:KGM55914.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysob
ArsR family transcriptional regulator
cn_combo_scaffold_4066_6
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2947..4374
DNA (1428bp) protein (476aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VR65_POLNA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM38143.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthale
cn_combo_scaffold_4066_7
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4413..5114)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000345772C
DSBA oxidoreductase {ECO:0000313|EMBL:KGM56967.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresi
DSBA oxidoreductase
cn_combo_scaffold_4066_8
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5151..6032)
DNA (882bp) protein (294aa)
transporter n=1 Tax=alpha proteobacterium L41A RepID=UPI00036CE584
Transporter {ECO:0000313|EMBL:KIC58213.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
transporter
cn_combo_scaffold_4066_9
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6029..6247)
DNA (219bp) protein (73aa)
Polyprenyl synthetase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WXJ7_PSEUU
polyprenyl synthetase
Polyprenyl synthetase {ECO:0000313|EMBL:ADV28863.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomo
cn_combo_scaffold_4066_10
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6303..7973)
DNA (1671bp) protein (557aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS
urocanate hydratase (EC:4.2.1.49)
urocanate hydratase n=1 Tax=Dyella ginsengisoli RepID=UPI00034DDB50
cn_combo_scaffold_4066_11
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8111..8692
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034A97F8
Uncharacterized protein {ECO:0000313|EMBL:EYR67122.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
hypothetical protein
cn_combo_scaffold_4066_12
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8735..9988
DNA (1254bp) protein (418aa)
phosphodiesterase-nucleotide pyrophosphatase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DA56A4
Phosphodiesterase-nucleotide pyrophosphatase {ECO:0000313|EMBL:EYR67127.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" sourc
phosphodiesterase
cn_combo_scaffold_4066_13
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9985..10509
DNA (525bp) protein (175aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U5U4_MYXSD
methylated-DNA--protein-cysteine methyltransferase
cn_combo_scaffold_4066_14
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10547..11497)
DNA (951bp) protein (317aa)
Formimidoylglutamase {ECO:0000256|HAMAP-Rule:MF_00737, ECO:0000256|SAAS:SAAS00012446}; EC=3.5.3.8 {ECO:0000256|HAMAP-Rule:MF_00737, ECO:0000256|SAAS:SAAS00012446};; Formiminoglutamase {ECO:0000256|HAM
formimidoylglutamase n=1 Tax=Ralstonia solanacearum RepID=UPI0002DFF114
hutG_1; formimidoylglutamase
cn_combo_scaffold_4066_15
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11662..12879
DNA (1218bp) protein (406aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase
imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VN23_9GAMM
cn_combo_scaffold_4066_16
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12893..14092
DNA (1200bp) protein (400aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM52590.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concret
dipeptidase id=2430552 bin=GWF1_Xanthomonadales_69_6 species=Pseudoalteromonas piscicida genus=Pseudoalteromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
membrane dipeptidase
cn_combo_scaffold_4066_17
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14189..14362)
DNA (174bp) protein (58aa)
Uncharacterized protein n=11 Tax=Stenotrophomonas RepID=B2FHJ4_STRMK
SSU ribosomal protein S31P {ECO:0000313|EMBL:EYR65747.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter caps
hypothetical protein
cn_combo_scaffold_4066_18
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14464..14877)
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WV84_PSEUU
Membrane protein {ECO:0000313|EMBL:KGM56953.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresiste
hypothetical protein
cn_combo_scaffold_4066_19
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14963..17137
DNA (2175bp) protein (725aa)
TonB-dependent receptor n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WV85_PSEUU
Membrane protein {ECO:0000313|EMBL:KGM56952.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresiste
TonB-dependent receptor
cn_combo_scaffold_4066_20
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17187..17684)
DNA (498bp) protein (166aa)
Ferric uptake regulator, Fur family n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WV88_PSEUU
Fur family transcriptional regulator {ECO:0000313|EMBL:AKC85951.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source=
Fur family ferric uptake regulator
cn_combo_scaffold_4066_21
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17768..19165)
DNA (1398bp) protein (466aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=913325 species="Bacteria; Pr
glutaminyl-tRNA synthetase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002F1AF8D
glutamyl-tRNA synthetase
cn_combo_scaffold_4066_22
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19344..20066
DNA (723bp) protein (241aa)
UDP-2,3-diacylglucosamine hydrolase {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063966}; EC=3.6.1.54 {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063978};; UDP-2,3-diacylgluco
UDP-2,3-diacylglucosamine hydrolase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000369EC8B
UDP-2,3-diacylglucosamine hydrolase
cn_combo_scaffold_4066_23
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20071..20526)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0547
Uncharacterized protein {ECO:0000313|EMBL:GAO54065.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
cn_combo_scaffold_4066_24
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20591..21394)
DNA (804bp) protein (268aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WV92_PSEUU
Anaerobic ribonucleoside triphosphate reductase {ECO:0000313|EMBL:EYR65733.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" so
hypothetical protein
cn_combo_scaffold_4066_25
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21507..21806)
DNA (300bp) protein (100aa)
amidophosphoribosyltransferase (EC:2.4.2.14); K00764 amidophosphoribosyltransferase [EC:2.4.2.14] Tax=GWF1_Xanthomonadales_69_6_curated
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase id=2840311 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Displaying 25 items

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