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cn_combo_scaffold_4508

Alias: XAN48_57

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_4508_1
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..864)
DNA (864bp) protein (288aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=216778 spe
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18)
anthranilate phosphoribosyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EFD3AA
cn_combo_scaffold_4508_2
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(867..1445)
DNA (579bp) protein (193aa)
NODE_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ97594.1}; EC=2.6.1.85 {ECO:0000313|EMBL:KIQ97594.1};; EC=4.1.3.27 {ECO:0000313|EMBL:KIQ97594.1};; TaxID=1199154 species="Bacteria; Proteobact
anthranilate synthase subunit II n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI0003747567
glutamine amidotransferase
cn_combo_scaffold_4508_3
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1447..2937)
DNA (1491bp) protein (497aa)
Anthranilate synthase component I {ECO:0000313|EMBL:KHL53314.1}; EC=4.1.3.27 {ECO:0000313|EMBL:KHL53314.1};; TaxID=92824 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xantho
Anthranilate synthase component I n=2 Tax=Xanthomonas RepID=V7ZJ68_9XANT
anthranilate synthase, component I
cn_combo_scaffold_4508_4
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3244..3921)
DNA (678bp) protein (226aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xant
Ribulose-phosphate 3-epimerase n=2 Tax=Xanthomonas campestris RepID=G0CJ48_XANCA
rpe; ribulose-phosphate 3-epimerase
cn_combo_scaffold_4508_5
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3918..4310)
DNA (393bp) protein (131aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN51379.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas compost
Heat shock protein DnaJ domain protein id=2651943 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Stenotrophomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
DnaJ domain-containing protein
cn_combo_scaffold_4508_6
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4381..5277
DNA (897bp) protein (299aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};;
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SXS2_XANCT
cn_combo_scaffold_4508_7
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5299..6744)
DNA (1446bp) protein (482aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UWV1_PSEUP
integral membrane sensor signal transduction histidine kinase
cn_combo_scaffold_4508_8
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6761..7444)
DNA (684bp) protein (228aa)
Two-component system regulatory protein n=23 Tax=Xanthomonas RepID=B0RXW3_XANCB
Transcriptional regulator {ECO:0000313|EMBL:KGM56378.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseni
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
cn_combo_scaffold_4508_9
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7484..7858)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TF96_STEMA
hypothetical protein Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
hypothetical protein
cn_combo_scaffold_4508_10
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7937..8848)
DNA (912bp) protein (304aa)
amidinotransferase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B3A8A9
Amidinotransferase {ECO:0000313|EMBL:KGM56379.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresis
hypothetical protein
cn_combo_scaffold_4508_11
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8845..9888)
DNA (1044bp) protein (348aa)
TIM-barrel protein, YjbN family; K05539 tRNA-dihydrouridine synthase A [EC:1.-.-.-] Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
tRNA-dihydrouridine synthase A n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI000366E18E
tRNA-dihydrouridine synthase A
cn_combo_scaffold_4508_12
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9967..11064
DNA (1098bp) protein (366aa)
Integrase n=1 Tax=Xylella fastidiosa 6c RepID=V8KE77_XYLFS
Phage integrase {ECO:0000313|EMBL:EAO14107.1}; TaxID=155919 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fastidiosa Dixon.;"
integrase rbh
cn_combo_scaffold_4508_13
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11099..11425
DNA (327bp) protein (109aa)
Phage-related protein n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0ACR7_COLFT
Uncharacterized protein {ECO:0000313|EMBL:KGM30727.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limos
phage-like protein
cn_combo_scaffold_4508_14
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11428..11715
DNA (288bp) protein (96aa)
Helix-turn-helix type 3 domain protein n=1 Tax=mine drainage metagenome RepID=T0ZXN3_9ZZZZ
XRE family transcriptional regulator Tax=RBG_16_Gallionellales_57_15_curated
Helix-turn-helix motif
cn_combo_scaffold_4508_15
unknown

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11742..12095
DNA (354bp) protein (118aa)

This feature has no annotations

cn_combo_scaffold_4508_16
unknown

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12145..12528
DNA (384bp) protein (128aa)

This feature has no annotations

Displaying 16 items

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