ggKbase home page

cn_combo_scaffold_5052

Alias: XAN48_72

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_5052_1
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..97)
DNA (96bp) protein (32aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1385517 species="Ba
Inorganic pyrophosphatase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UTD4_PSEUP
inorganic pyrophosphatase
cn_combo_scaffold_5052_2
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

300..1934
DNA (1635bp) protein (545aa)
NAD+ synthetase; K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
nadE; NAD synthetase (EC:6.3.1.5)
NAD synthetase n=1 Tax=Xanthomonas sacchari RepID=UPI000262A8A1
cn_combo_scaffold_5052_3
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1943..2782)
DNA (840bp) protein (280aa)
competence protein n=1 Tax=Xanthomonas sacchari RepID=UPI000263017F
competence protein
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae;
cn_combo_scaffold_5052_4
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2889..3869
DNA (981bp) protein (327aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonad
23S rRNA pseudouridine synthase D n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000307B200
pseudouridine synthase
cn_combo_scaffold_5052_5
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3866..4600
DNA (735bp) protein (245aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WQG9_PSEUU
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas maltha
hypothetical protein
cn_combo_scaffold_5052_6
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4597..5205
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00030E49A6
Uncharacterized protein {ECO:0000313|EMBL:AKC86103.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxantho
hypothetical protein
cn_combo_scaffold_5052_7
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5258..5551)
DNA (294bp) protein (98aa)
GIY-YIG nuclease n=1 Tax=Xanthomonas oryzae RepID=UPI0002E4B14A
GIY-YIG nuclease {ECO:0000313|EMBL:KGE51463.1}; TaxID=325777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv
GIY-YIG nuclease superfamily protein
cn_combo_scaffold_5052_8
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5548..6858)
DNA (1311bp) protein (437aa)
peptidase, M20/M25/M40 family; K01295 glutamate carboxypeptidase [EC:3.4.17.11] Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
Peptidase, M20/M25/M40 family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RE44_PHEZH
peptidase, M20/M25/M40 family
cn_combo_scaffold_5052_9
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6991..9573
DNA (2583bp) protein (861aa)
Heat shock chaperone ClpB n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TYX3_STEMA
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeo
clpB; heat shock chaperone ClpB
cn_combo_scaffold_5052_10
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9824..11527)
DNA (1704bp) protein (568aa)
cation:proton antiport protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00031AC4ED
potassium efflux system protein
Potassium efflux system protein {ECO:0000313|EMBL:ADV26432.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseu
cn_combo_scaffold_5052_11
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11635..11955)
DNA (321bp) protein (107aa)
ligand-gated channel n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002F45D2A
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ADV26433.1}; Flags: Precursor;; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" s
Displaying 11 items

View Taxonomy