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cn_combo_scaffold_5056

Alias: XAN48_73

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_5056_1
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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384..1547
DNA (1164bp) protein (388aa)
Peptidase S58 DmpA n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XH71_9BACT
D-aminopeptidase {ECO:0000313|EMBL:AKC88307.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas s
peptidase S58 DmpA
cn_combo_scaffold_5056_2
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1554..2663)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T232_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT67950.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboni
LuxR family transcriptional regulator
cn_combo_scaffold_5056_3
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2871..3893
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDY9_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
hypothetical protein
cn_combo_scaffold_5056_4
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3931..4914
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00036AB6BE
mandelate racemase/muconate lactonizing protein
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ABZ70258.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" so
cn_combo_scaffold_5056_5
Rhodococcus equi, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4978..6117)
DNA (1140bp) protein (380aa)
Putative beta-lactamase n=1 Tax=Rhodococcus equi (strain 103S) RepID=E4WIC9_RHOE1
beta-lactamase
Putative beta-lactamase {ECO:0000313|EMBL:CBH48686.1}; TaxID=685727 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus equi (strain 103S) (Corynebac
cn_combo_scaffold_5056_6
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6449..6958
DNA (510bp) protein (170aa)
Putative acyl-coa hydrolase protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2U9I7_XANAP
Acyl-CoA hydrolase {ECO:0000313|EMBL:KGM52547.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis
acyl-CoA hydrolase
cn_combo_scaffold_5056_7
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7005..7664)
DNA (660bp) protein (220aa)
cell-wall hydrolase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003193107
Uncharacterized protein {ECO:0000313|EMBL:EYR65899.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
NLP/P60 protein
cn_combo_scaffold_5056_8
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7811..8383)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031DAF55
Uncharacterized protein {ECO:0000313|EMBL:EYR65900.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
NLP/P60 protein
cn_combo_scaffold_5056_9
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8446..8928
DNA (483bp) protein (161aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Stenotrophomonas maltophilia RepID=B4SQZ0_STRM5
FKBP-type peptidylprolyl isomerase
cn_combo_scaffold_5056_10
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9311..10582
DNA (1272bp) protein (424aa)
D-amino acid dehydrogenase subunit n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7HHC1_XANCT
Amino acid dehydrogenase {ECO:0000313|EMBL:KGM57005.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arsenic
D-amino acid dehydrogenase small subunit
cn_combo_scaffold_5056_11
unknown

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10657..10845
DNA (189bp) protein (63aa)

This feature has no annotations

cn_combo_scaffold_5056_12
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(11011..11655)
DNA (645bp) protein (215aa)
DNA topoisomerase IV subunit beta (EC:5.99.1.3)
DNA topoisomerase 4 subunit B n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WRL0_PSEUU
DNA topoisomerase IV subunit B {ECO:0000313|EMBL:KIJ71976.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;
Displaying 12 items

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