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cn_combo_scaffold_5417

Alias: XAN48_83

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_5417_1
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..211
DNA (210bp) protein (70aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=B4SM21_STRM5
Membrane protein {ECO:0000313|EMBL:KGM53331.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis G
hypothetical protein
cn_combo_scaffold_5417_2
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(276..1103)
DNA (828bp) protein (276aa)
Exodeoxyribonuclease III n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UTY4_PSEUP
exodeoxyribonuclease III
Exodeoxyribonuclease III {ECO:0000313|EMBL:AER57418.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxant
cn_combo_scaffold_5417_3
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1320..1673
DNA (354bp) protein (118aa)
peptidylprolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=743721 species="Bacteria; Proteobacteria; Gammapr
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WWE0_PSEUU
cn_combo_scaffold_5417_4
unknown

Not on your lists

1744..2487
DNA (744bp) protein (248aa)

This feature has no annotations

cn_combo_scaffold_5417_5
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2506..2808)
DNA (303bp) protein (101aa)
Uncharacterized protein {ECO:0000313|EMBL:KGQ17920.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdone
cn_combo_scaffold_5417_6
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3010..3381
DNA (372bp) protein (124aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM51828.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concret
cn_combo_scaffold_5417_7
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3481..3984)
DNA (504bp) protein (168aa)
Uncharacterized protein n=3 Tax=Acinetobacter RepID=N9MFJ6_9GAMM
Membrane protein {ECO:0000313|EMBL:KGO99898.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB
lipocalin
cn_combo_scaffold_5417_8
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4120..5058)
DNA (939bp) protein (313aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VKC3_CAUST
endonuclease/exonuclease/phosphatase Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
endonuclease/exonuclease/phosphatase
cn_combo_scaffold_5417_9
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5217..5759
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034A6B09
Membrane protein {ECO:0000313|EMBL:AKC88026.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas s
membrane protein
cn_combo_scaffold_5417_10
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5764..5958
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UUQ0_PSEUP
Uncharacterized protein {ECO:0000313|EMBL:EYR68416.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
hypothetical protein
cn_combo_scaffold_5417_11
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6052..6609)
DNA (558bp) protein (186aa)
Beta-Ig-H3-fasciclin repeat containing protein n=1 Tax=Xanthomonas campestris pv. raphani 756C RepID=G0CB16_XANCA
NODE_15, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96790.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lys
beta-Ig-H3-fasciclin repeat containing protein
cn_combo_scaffold_5417_12
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6905..7444
DNA (540bp) protein (180aa)
calcium-binding protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FEE217
Uncharacterized protein {ECO:0000313|EMBL:KGM53661.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeon
hypothetical protein
cn_combo_scaffold_5417_13
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7661..8233)
DNA (573bp) protein (191aa)
NADPH-dependent FMN reductase n=1 Tax=Rhodanobacter denitrificans RepID=I4WUS3_9GAMM
NADPH:quinone oxidoreductase {ECO:0000313|EMBL:KGQ20394.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter do
putative flavoprotein
cn_combo_scaffold_5417_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8330..9349)
DNA (1020bp) protein (340aa)
threonine aldolase (EC:4.1.2.5)
Threonine aldolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVI9_9GAMM
Threonine aldolase {ECO:0000313|EMBL:EIL91230.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathi
cn_combo_scaffold_5417_15
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9585..9929
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000303182B
Uncharacterized protein {ECO:0000313|EMBL:KGQ17913.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdone
hypothetical protein
cn_combo_scaffold_5417_16
Pseudomonas oryzihabitans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10370..10708
DNA (339bp) protein (113aa)
Alkylphosphonate utilization operon protein PhnA n=1 Tax=Pseudomonas psychrotolerans L19 RepID=H0JCG8_9PSED
Alkylphosphonate utilization protein {ECO:0000313|EMBL:KIZ52896.1}; TaxID=47885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudo
alkylphosphonate utilization operon protein PhnA
cn_combo_scaffold_5417_17
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10962..11207
DNA (246bp) protein (82aa)
hemerythrin n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0003108833
hemerythrin HHE cation binding domain-containing protein
Hemerythrin HHE cation binding domain protein {ECO:0000313|EMBL:ADV28539.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;
cn_combo_scaffold_5417_18
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11240..11755)
DNA (516bp) protein (172aa)
adenine phosphoribosyltransferase (EC:2.4.2.7); K00759 adenine phosphoribosyltransferase [EC:2.4.2.7] Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
adenine phosphoribosyltransferase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00030071CB
adenine phosphoribosyltransferase
cn_combo_scaffold_5417_19
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11821..12579
DNA (759bp) protein (253aa)
haloacid dehalogenase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000308F41B
Haloacid dehalogenase {ECO:0000313|EMBL:KGO98896.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii
haloacid dehalogenase
cn_combo_scaffold_5417_20
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12576..13451
DNA (876bp) protein (292aa)
KR domain protein n=1 Tax=Acinetobacter baumannii OIFC021 RepID=L9M5C9_ACIBA
short-chain dehydrogenase/reductase SDR Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
short-chain dehydrogenase/reductase SDR
cn_combo_scaffold_5417_21
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13552..14208
DNA (657bp) protein (219aa)
Uncharacterized protein {ECO:0000313|EMBL:KGQ17908.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdone
Uncharacterized protein id=2637987 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
cn_combo_scaffold_5417_22
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14352..15296)
DNA (945bp) protein (315aa)
3-methylitaconate isomerase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002E239CE
AcnD-accessory protein PrpF {ECO:0000313|EMBL:EEG09058.1}; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogul
AcnD-accessory protein PrpF
Displaying 22 items

View Taxonomy